Pairwise Alignments

Query, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

 Score =  462 bits (1189), Expect = e-135
 Identities = 231/378 (61%), Positives = 275/378 (72%), Gaps = 2/378 (0%)

Query: 8   SQTGPVTELTKALIARPSVTPLDEGCQTLMAERLAAIGFNIEAMVFEDTTNMWARRGNT- 66
           ++  P  +L   LI RPSVTP+D  CQ  M  RL A+GF +E M  ED  N WA  G+  
Sbjct: 5   AELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWATHGSQD 64

Query: 67  GPVFCFAGHTDVVPTGDLSRWHTPPFEPTI-IDGYLYGRGAADMKGSLAAMVVATERFVA 125
           GPV CFAGHTDVVPTG + +W   PFE  I  DG L GRGAADMKGSLA+MV+A+ERFV 
Sbjct: 65  GPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASERFVQ 124

Query: 126 KHPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVKNG 185
            +PNH G +AFLITSDEEGP  +GT  V++ L+ARNE++ W +VGEPSST  LGDVVKNG
Sbjct: 125 DYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDVVKNG 184

Query: 186 RRGSLTANLTVKGVQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNAFFPPTSMQIANI 245
           RRGSL A LT++G QGHVAYPHLA NPIH AAP LAEL+  HWD GNAFFPPTS QI+N+
Sbjct: 185 RRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQISNL 244

Query: 246 NGGTGASNVIPGALEVMFNFRYSTEVTAEILIERVETLLTAHELDYDIRWTFNGLPFLTG 305
           N GTGA+NV+PG L  +FNFR+STE T E L  RV  +L  HELD+ + W  +GLPFLT 
Sbjct: 245 NSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLPFLTE 304

Query: 306 EGPLLDATRHAIRQVTGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECVKV 365
            G LLDA   +I+ VTG DT P T+GGTSDGRFIA  G +V+ELGPVNATIH+V+E +  
Sbjct: 305 PGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDERILA 364

Query: 366 DDLEQLALCYEVILEQLL 383
            DL+ L   Y   L +LL
Sbjct: 365 SDLDLLTEIYYQTLVRLL 382