Pairwise Alignments

Query, 891 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 936 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  339 bits (869), Expect = 5e-97
 Identities = 290/961 (30%), Positives = 455/961 (47%), Gaps = 95/961 (9%)

Query: 1   MTTQTTVARAVRFSLLALVSTSI--APIAMAAEQGAVDANKVERIAVTGSRIQRTDMETS 58
           M     +A++VRF+L+  V+ +    P+ MAA++   D  KVERI VTGSRI+RTDME +
Sbjct: 1   MHKNNLLAKSVRFALIGGVAATALNVPLVMAADEAGAD-KKVERIEVTGSRIKRTDMEAA 59

Query: 59  SPVTVISRAEIDASGTATVSDFVRNLSQNSFGSFREASGFGSGQSSQSTVSMRGLGSQRT 118
           SPV  ++R EI+A+G  +V D ++ +   + GS    + F +G    + + +R LGSQR 
Sbjct: 60  SPVLSMNRDEIEATGMISVGDILQTIP--AAGSALNTA-FNNGGDGSTNMDLRNLGSQRL 116

Query: 119 LVLIDGRRMGSSVAFGGGTQNLNVVPMAAIERIEVLRDGASAVYGSDAVAGVINIITKKE 178
           LVL++G+R  SS+   G T +LN +P + IERI+VL+DGASAVYGSDA+AGV+NIIT+K 
Sbjct: 117 LVLVNGKRWISSL---GSTVDLNTIPTSTIERIDVLKDGASAVYGSDAIAGVVNIITRKN 173

Query: 179 FEGVEFDADLGA-TQHGGAEKSNARFTFGVNSEKTNMVASVEYYNRAALYDADRDYSDTL 237
           FEGVE     G   ++    +  A FT G  SEK  ++ ++ +  +  ++  DRD SDT 
Sbjct: 174 FEGVEVSVYGGQNAKYDDGRQYTADFTVGSVSEKGGLLFNMAHVTQQPIWAGDRDISDTG 233

Query: 238 YSAHG----WPGTGSYVDK-TKPILDADGKP--TGKYQTVSFADKRCGEGNSLVTGPDGN 290
           YS+          GS +++  +  L A GKP  +G Y  +S        G        G+
Sbjct: 234 YSSTADNTRIRVKGSQLNQANQDALAAIGKPNSSGIYDYMSKEGTGANVGMDQFRPRTGS 293

Query: 291 QTCSYNAAAESATMAAQERFSTFVKVDHELTEDINWTNRLMMSRVWTEGQYAAAPNSYSP 350
               YN A ++     Q R S +V+  +++++++   +  MM+   +  + A  P +   
Sbjct: 294 DV--YNFAPDNYLSTPQNRNSFYVQGFYDISDNLRVVSDFMMTNRKSSQELAPMPLTLGA 351

Query: 351 KLRWTKENSDIYLATV-NKYGNDYLKNQLKYDAKGNLIGGDTINLKMRTTPLGPRVTNVE 409
                    DI    + N +G     +  +  A G  +G     L+ R    G R  N  
Sbjct: 352 SFGAAASRVDIGGNNIYNPFGETLYGDSARAVANGKPVGYVPYALQRRMVEAGSRQYNQN 411

Query: 410 DTDINFLTALEGHSDILGGTAWNLGAQWIRSDVTTIQTGLANANMIQEFL------DNG- 462
           DT    +  LEG  +I    +W     + +++   + TGL N   I + L       NG 
Sbjct: 412 DTTYRAMVGLEG--NINDNWSWTASYIYGQNNQDVLTTGLLNLTRINQALGDNCNASNGC 469

Query: 463 -KLDYFAAGTGYVEGSNELQLQEAAHTGIFTGRVQTYGIDGGASFDLFELPAGTVPLAIG 521
             L+ F       +   +    ++      T +  T+ I G    DLF+LPAG V LA G
Sbjct: 470 VALNLFGGPGSVTQDMVDYITFDSVSRSGLTMKDYTFNIAG----DLFDLPAGPVGLAFG 525

Query: 522 FEFMRTEYDKTND----AGSNLGN-IIGTSGGDNIQGKSREVLSFSAETMFPIIDGLDLE 576
            E        T D     G + GN    TSGG  +           AE   P+I+ L + 
Sbjct: 526 LERREESGFDTPDPLTVTGESSGNQRDATSGGFRLD-------EAYAELAIPVIESLLIT 578

Query: 577 LSARFDDYSDFGSTFNPKVGLSYRPVDSLLVRASYGTGFRAPTFDDLYATASETY-LW-- 633
            + R  D+  +G+    KVG  +RP+D +L+R ++  G+RAP+  DLYA ++++Y  W  
Sbjct: 579 PAVRVSDHDAYGNNTTGKVGAEFRPMDDMLLRGTWAQGYRAPSISDLYAGSADSYPTWND 638

Query: 634 ---ARD----------WTQCPGNPNGCVQ--EQFKAQYQGNDDLEPEESTSLSLGLVWNV 678
               RD             C G P+G  Q   Q +     + DL+PE S S + G V+N 
Sbjct: 639 PCNTRDSKGNVLNISGLPGCAGVPDGYRQANTQIRISQVSSPDLKPETSESYTFGTVYNP 698

Query: 679 T--DALDFELSYYDIQIDNVISTMSTQDVLNQERDGFDMSNV--LFRDPVTGKIDYVVLQ 734
           +  +  +F + YY+I++++ I       +  +   G  +S+   + RD +   +D     
Sbjct: 699 SWLEGAEFTVDYYNIKVEDAIGRYGHTTIARECATGDKVSSCDKIDRDSLGNIVDLRNFL 758

Query: 735 KMNLGELKTSGIDFNIRYLL-ETSVGEFRFGAETNYVLSWESKDGPYSELEDIIGDVGQP 793
           + N G  +  GIDF   Y   ETS G F+   +  YVL  E      + ++   GD G P
Sbjct: 759 Q-NAGTYEVEGIDFFTAYRFPETSFGSFKTSLDLAYVLGNEFDGEDRAGIQ--YGDGGFP 815

Query: 794 QFRANLSTTWTQGEWEASLFARYT---------------DSQEDEDYGKTPSQWLL-DAQ 837
           + + +L+  W  G+W+A    RY                D  +D  Y +T S +++ +  
Sbjct: 816 ELKGSLNIDWAMGDWDAHWKMRYVGELTSDFYANDPANYDFYKDNGYRETFSAYMVHNVS 875

Query: 838 AGYNL-PWNAKVNVGIRNLLDEE-----PAMNENLGFPGYDTYLYD-PIGREYYVRYNQK 890
            GYN+  +N KV++GI NL   E     P  NE L    +    YD  + R  Y+R   K
Sbjct: 876 VGYNIEDYNTKVSLGINNLFATEPQAEGPTNNEALSSNNFSVTEYDVNMDRFIYLRATTK 935

Query: 891 F 891
           F
Sbjct: 936 F 936