Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  280 bits (716), Expect = 3e-80
 Identities = 147/297 (49%), Positives = 208/297 (70%), Gaps = 6/297 (2%)

Query: 1   MKTRSDDLEILLAVVDSGGFSAAAELLDIQVARVSRAVSKVESQVGVSILNRTTRRLELT 60
           MKTRS++L++ +AV+D G  SAAAE +    + VSR +S++E ++G +++NRTTRR++LT
Sbjct: 1   MKTRSEELQVFVAVIDCGSISAAAEQMGQTPSAVSRTLSRLEGKLGTTLVNRTTRRMDLT 60

Query: 61  EEGRQFVETIRLGLLQIQQAEEEIITRGELPRGRLRVDAASPFVFHQLVPLIRPFKQTYP 120
           EEGR F+E  RL L Q+ + EE +    + P GRLR++AA+PF+ H ++P I  F++ YP
Sbjct: 61  EEGRYFLERARLILQQMDEMEERLSMNRQTPTGRLRINAAAPFMLHAILPWIGEFRRQYP 120

Query: 121 DIELELTSNEGFVDLLEKKTDLAIRIGNLTDSTLHARPLGKSLLYIVASPDYLSRRGFPN 180
            IELEL +++  +DLLE+ TD+AIRIG L DS+LHAR LG S + ++ASP YL + G P 
Sbjct: 121 GIELELNTDDLIIDLLEQSTDVAIRIGELADSSLHARSLGCSPVQVLASPAYLEQHGTPR 180

Query: 181 KSSDLIHHDSLGFSTPKTLNDWPLKGFT----RLTPTLTSSNGETLRQLALTGNGIACLS 236
           +  DL +H  LGFS P++LN WPL+        + PTL +S+GETLRQLAL G GI  LS
Sbjct: 181 QVEDLANHCLLGFSQPESLNHWPLRHAQGDRWSIRPTLVASSGETLRQLALAGEGIVSLS 240

Query: 237 GFMVKKDIAEGRLIPLLESEKISNSGREHINAVYYKSSTVAKRISAFIDFIQPKLAL 293
            FM  +DI  GRL  LL   + +N  R+ I+AVYY+++ +A RI  F+DFIQ KLA+
Sbjct: 241 HFMTHEDIRTGRLQVLL--SEANNGYRQPIHAVYYRNTQLALRIQCFLDFIQRKLAM 295