Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 231 a.a., channel protein, hemolysin III family from Kangiella aquimarina DSM 16071

 Score =  197 bits (500), Expect = 2e-55
 Identities = 96/217 (44%), Positives = 131/217 (60%), Gaps = 1/217 (0%)

Query: 2   HQEKPLNISAYSLSEEIANSISHGLGVIAGAVGLIFMLLKGVDHLSSIQLTGVIIYGASL 61
           H +  L    YS+ EE+AN+++HG+G +     +  M++  V      +L   I+YG SL
Sbjct: 15  HLDVELTEHTYSIGEEVANALTHGIGALLSVAAMTMMIMTSVQLGDGWKLASSIVYGISL 74

Query: 62  ILLFLSSTLYHSVTHRGWKHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIWS 121
           ++LF SSTLYHS      K   +  DHCAIY LIAGTYTP +L+SL G    ++   IW 
Sbjct: 75  VILFTSSTLYHSFQPESIKKVFQTFDHCAIYFLIAGTYTPFVLVSLNGVWGWVLFGIIWG 134

Query: 122 LAIGGILFKTLFIHRFKKLSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTLG 181
           LA  G++FK  F  RF ++SL+ Y+ MGW+ +    ++   +      LL  GGL YTLG
Sbjct: 135 LAFFGVIFKVAFKQRFPRVSLITYILMGWVIVVAAEEMLEKVPAPALWLLFAGGLSYTLG 194

Query: 182 VIFYVG-KRIPYNHAIWHLFVLAGAMSHFFCIYLTVI 217
            IFY   K+IP+NHAIWHLFVL GA+ HF  +YL VI
Sbjct: 195 TIFYAADKKIPFNHAIWHLFVLGGAVCHFLAVYLYVI 231