Pairwise Alignments

Query, 721 a.a., thiamin biosynthesis protein ThiC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 631 a.a., Thiamin biosynthesis protein ThiC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  948 bits (2451), Expect = 0.0
 Identities = 456/600 (76%), Positives = 517/600 (86%), Gaps = 4/600 (0%)

Query: 21  RRVARAQAQAFIDTLKPLQHPNSQKLYLQGSRADLRVGMRQILQTDTRIGGRAAAPNVEK 80
           RR  RA+AQ FIDTL+    PNS+++Y+ GS+ D+RV MR+I  + T IGG    P  E+
Sbjct: 8   RREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRVPMREIQLSPTLIGGSKDNPQFEE 67

Query: 81  NPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDTEVLDCTTSDFTQQRLKDDGL 140
           N  +PVYD +GPY DP   INV+QGLAKLR PWI  R D+E LD  +S +T++RL DDGL
Sbjct: 68  NEAVPVYDTSGPYGDPEVAINVQQGLAKLRQPWIDARNDSEELDDRSSAYTRERLADDGL 127

Query: 141 DHLRFEAGSSAIIRPRRALPGKRVSQLHYARQGIITPEMEYVAIRENMALADVQDEILNR 200
           D LRF    + ++ P+RA  GKRV+QLHYAR+GI+TPEME++AIRENM    ++ E+L  
Sbjct: 128 DDLRF----TGLLTPKRAKAGKRVTQLHYARKGIVTPEMEFIAIRENMGRERIRSEVLRH 183

Query: 201 RGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEAEPMTIGRNFLVKVNANIGNS 260
           +  G +FGA + + ITPEFVRDE+A GRAIIP NINHPE+EPM IGRNFLVKVNANIGNS
Sbjct: 184 QHPGMNFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNS 243

Query: 261 AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKV 320
           AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI+RNSPVPIGTVPIYQALEKV
Sbjct: 244 AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKV 303

Query: 321 NGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWC 380
           NG+AE LTWE FRDTL+EQAEQGVDYFTIHAGVLLRYVPMTAKR+TGIVSRGGSIMAKWC
Sbjct: 304 NGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWC 363

Query: 381 LSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVNIA 440
           LSHH+ENFL+ HFREICE+C AYDVSLSLGDG+RPGSI DANDEAQF+EL TLGEL  IA
Sbjct: 364 LSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIA 423

Query: 441 WEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIGAA 500
           WEYDVQ +IEGPGH+PM +I+ NM ++L  C EAPFYTLGP  TDIAPGYDHFTSGIGAA
Sbjct: 424 WEYDVQVMIEGPGHVPMHMIQRNMTEELESCHEAPFYTLGPLTTDIAPGYDHFTSGIGAA 483

Query: 501 MIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKA 560
           MI W+GCAMLCYVTPKEHLGLPNK+DVKQGLI YKIAAHAAD+AKGHPGAQIRDNA+SKA
Sbjct: 484 MIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKA 543

Query: 561 RFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAAS 620
           RFEFRWEDQ+NL LDP TARAYHDE+LPQES KVAHFCSMCGPKFCSMKI+Q+VRDYAA+
Sbjct: 544 RFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAA 603