Pairwise Alignments

Query, 721 a.a., thiamin biosynthesis protein ThiC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 631 a.a., phosphomethylpyrimidine synthase from Escherichia coli BL21

 Score =  957 bits (2473), Expect = 0.0
 Identities = 463/600 (77%), Positives = 515/600 (85%), Gaps = 4/600 (0%)

Query: 21  RRVARAQAQAFIDTLKPLQHPNSQKLYLQGSRADLRVGMRQILQTDTRIGGRAAAPNVEK 80
           RR  RAQAQ FIDTL+    PNS+++Y+ G++  +RV MR+I  + T IGG    P  E+
Sbjct: 8   RREQRAQAQHFIDTLEGTAFPNSKRIYITGTQPGVRVPMREIQLSPTLIGGSKEQPQYEE 67

Query: 81  NPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDTEVLDCTTSDFTQQRLKDDGL 140
           N  IP YD +GPY DP   INV+QGLAKLR PWI  R DTE L   +SD+T+ RL DDGL
Sbjct: 68  NEAIPAYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKARLADDGL 127

Query: 141 DHLRFEAGSSAIIRPRRALPGKRVSQLHYARQGIITPEMEYVAIRENMALADVQDEILNR 200
           D LRF    S ++ P+RA  G+RV+QLHYARQGIITPEME++AIRENM    ++ E+L  
Sbjct: 128 DELRF----SGLLTPKRAKTGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEVLRH 183

Query: 201 RGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEAEPMTIGRNFLVKVNANIGNS 260
           +  G SFGA + + IT EFVRDE+A GRAIIP NINHPE+EPM IGRNFLVKVNANIGNS
Sbjct: 184 QHPGMSFGARLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNS 243

Query: 261 AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKV 320
           AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI+RNSPVPIGTVPIYQALEKV
Sbjct: 244 AVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKV 303

Query: 321 NGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWC 380
           NG+AE LTWE FRDTL+EQAEQGVDYFTIHAGVLLRYVPMTAKR+TGIVSRGGSIMAKWC
Sbjct: 304 NGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWC 363

Query: 381 LSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVNIA 440
           LSHHQENFLY HFREICE+C AYDVSLSLGDG+RPGSI DANDEAQFAEL TLGEL  IA
Sbjct: 364 LSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIA 423

Query: 441 WEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIGAA 500
           WEYDVQ +IEGPGH+PMQ+I+ NM ++L HC EAPFYTLGP  TDIAPGYDHFTSGIGAA
Sbjct: 424 WEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAA 483

Query: 501 MIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKA 560
           MI W+GCAMLCYVTPKEHLGLPNK+DVKQGLI YKIAAHAAD+AKGHPGAQIRDNA+SKA
Sbjct: 484 MIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKA 543

Query: 561 RFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAAS 620
           RFEFRWEDQ+NL LDP TARAYHDE+LPQES KVAHFCSMCGPKFCSMKI+Q+VRDYAA+
Sbjct: 544 RFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAT 603