Pairwise Alignments

Query, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  270 bits (690), Expect = 3e-76
 Identities = 248/915 (27%), Positives = 402/915 (43%), Gaps = 93/915 (10%)

Query: 1   MIKRTKVASAINLAVVSSIAAGAFVASSAFAAEE-TAKVERIEVTGSRIQRQDMETASPV 59
           M   + +  A+  A++      A    S FAAE+  AKVERIEVTGSRIQR DME+A PV
Sbjct: 1   MRANSTLTKAVRFALIGGATTAALSTMSVFAAEDDNAKVERIEVTGSRIQRTDMESALPV 60

Query: 60  TVIDAAAIKAEGFTSVDQML-QVQTSMAGAAVGSTTNNGADGVAQVDLRGMGSQRTLVLL 118
           TV+ A  I   G + V  +L Q+  + AG+ + S   + A   A   +RG+GS RTL L+
Sbjct: 61  TVLSAEDIAKTGLSDVSAVLAQMPFNTAGSFI-SDAGSSASNHASSGMRGLGSNRTLTLI 119

Query: 119 NGRRMVNSGSGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGF 178
           NGRR+  S +    A +LN IP+  I R+EIL+DGASA+YGSDAI GV+NII KK F+G 
Sbjct: 120 NGRRIAPSATFGGDATNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFDGL 179

Query: 179 QFDMNGSGTDKGDGQSGDVSALYGFNTDGGNYTFGAAYSDRRGVIQGDR-----DWYDPL 233
            FD       +G       S  +G  +D  +      +     +  G R     +W +  
Sbjct: 180 AFDAKFGNPTQGGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWDEKY 239

Query: 234 DNTSSIIPTGT----LNQKVIDANGNWVKRTET------------------------YDY 265
             ++   P GT     ++ +  A+G +     T                        +++
Sbjct: 240 GRSALYAPEGTYRPVASRPIKGADGTFSDPVYTGLQVPGKDCPADRIVTSKAGSACGFNH 299

Query: 266 SNDVYFQTPSERRSLFANMTQELGNDVVLTADAIYTNRRSNQQLAAQPAQIKLNVCGDPR 325
            +   +     + S+F+NMT  + +++     AI    +S     A      L +  D  
Sbjct: 300 FDGTDYLPDQTKDSVFSNMTYRITDELEWFGQAIVMRDKSITSSTALWTP-NLYIAADNP 358

Query: 326 VQDPTAGCLTLDQGMIDAGIKADARGQVQYNRRMNDVGPRIYNQDTDTWRLSAGLAGSLD 385
           + +PT G                   +VQ   R+  V  R    D++   +  GL   LD
Sbjct: 359 L-NPTFGTAN--------------ASEVQAYHRLKGVADRTTEFDSNVVDVVTGLNLELD 403

Query: 386 VHTGMNWNVDYTFGKNEAKTGVDNSINATLMANSIYADPYAWF-EGSPLTDDMKDVSYQQ 444
             + ++W V Y+      +T  D+ +    +  ++    Y  F EG   T    D ++  
Sbjct: 404 AGS-LSWYVQYSDQIVNIET--DSYVFEDKLQEAVDKGLYNPFVEGGNATQATLD-TFLH 459

Query: 445 QSTGGNEQQTLSAGLNGEL---FDLSAGAVGFAIGAEYRRESGFYNPDPVVVAGDSTAAQ 501
            +T      T   GL+        L  G +G+A+G EY++       D    AG+     
Sbjct: 460 TATRKATSNTTGTGLSWAALAPISLPGGDLGYAVGMEYQKIEYKDTRDAQQAAGNVLGTY 519

Query: 502 QDPTSGNYNVISIFEEVSVPFTEKLTGEFALRLDDYS--TFGKATTWKIGLTYTATDELM 559
              ++G+ +  + F E+ +P  + L  + A R D YS    G+ +   + + Y A D L+
Sbjct: 520 GGDSAGDRSYKAAFVELELPVLDHLNVKLASRYDQYSLPDVGQLSN-SVNVRYEALDNLV 578

Query: 560 VRTVAATGFRAPSVAELYGGNSGSFDYLTNPW----LPASEQTG-------QILVNRTSD 608
           +R     GFRAPS+ +L G  + S+DY+T+      LPA +Q G       Q L   + +
Sbjct: 579 LRASYGQGFRAPSLDDLLGEPATSYDYVTDTTLCQSLPADQQKGNPACEDTQYLRKSSGN 638

Query: 609 PDLKPEESESYTAGLVYSPSYIDGMSITLDYWRFKVTDAIARADVQVGLDACHAGDAEAC 668
            +L+PE+S  Y+ G V+  +  + +   +DY+  ++TD ++  D Q  +D    G   A 
Sbjct: 639 KELEPEKSAQYSFGAVW--NITENIDFVVDYYNIEITDQVSYIDAQTIVDLEAIGGLGAY 696

Query: 669 STFNI----TADGDLFNLTSALTNVGSQDTSGIDFNLAYNFELFGL-DWKVSNDTTYLIK 723
               I     ADG +  + +   N+    TSG+D +   NF+L  L  +K + + TY ++
Sbjct: 697 DPNYIYVKRKADGTIDEIGAGNINMDGVQTSGLDVSFTSNFDLADLGTFKFAVEGTYALE 756

Query: 724 FEQDGENYTGTID--GNMGAYARVRNNFSISAGQDDWSVMYFNRYIRSM---TDVYTDYD 778
           + +         D  G  G Y  +R N + S   DD+S     +YI S    T    +  
Sbjct: 757 YTEQASPIAKRYDVLGTKG-YPPLRFNTTFSYAIDDFSTSLIAKYIDSYDGETPQQQEVG 815

Query: 779 ANDNPFVAVRGVDSILYHNISGTYHVSDNTTVSLGVKNLTDEKPLYVTNGSDAGTVPQVY 838
            N   F       S    +++  Y  +    V++G +NL D  P    +    G     +
Sbjct: 816 TNKQDF------SSFTTWDLTFNYDFNSYGNVTVGARNLFDAMPAVNYSLGYPGYDTDTH 869

Query: 839 DTVGRTIYGGVTVKF 853
           + +GR ++ G  VKF
Sbjct: 870 NILGRVVFAGYKVKF 884