Pairwise Alignments

Query, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 891 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  337 bits (865), Expect = 1e-96
 Identities = 271/909 (29%), Positives = 415/909 (45%), Gaps = 74/909 (8%)

Query: 1   MIKRTKVASAINLAVVSSIAAGAFVASSAFAAEETA----KVERIEVTGSRIQRQDMETA 56
           M  +T VA A+  ++++ ++    +A  A AAE+ A    KVERI VTGSRIQR DMET+
Sbjct: 1   MTTQTTVARAVRFSLLALVSTS--IAPIAMAAEQGAVDANKVERIAVTGSRIQRTDMETS 58

Query: 57  SPVTVIDAAAIKAEGFTSVDQMLQ--VQTSMAGAAVGSTTNNGADGVAQVDLRGMGSQRT 114
           SPVTVI  A I A G  +V   ++   Q S       S   +G    + V +RG+GSQRT
Sbjct: 59  SPVTVISRAEIDASGTATVSDFVRNLSQNSFGSFREASGFGSGQSSQSTVSMRGLGSQRT 118

Query: 115 LVLLNGRRMVNSGSGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKD 174
           LVL++GRRM +S +      +LN +P+A I R+E+L+DGASAVYGSDA+AGV+NIITKK+
Sbjct: 119 LVLIDGRRMGSSVAFGGGTQNLNVVPMAAIERIEVLRDGASAVYGSDAVAGVINIITKKE 178

Query: 175 FEGFQFDMNGSGTDKGDGQSGDVSALYGFNTDGGNYTFGAAYSDRRGVIQGDRDWYDPLD 234
           FEG +FD +   T  G  +  +    +G N++  N      Y +R  +   DRD+ D L 
Sbjct: 179 FEGVEFDADLGATQHGGAEKSNARFTFGVNSEKTNMVASVEYYNRAALYDADRDYSDTLY 238

Query: 235 NTSSIIPTGTLNQK---VIDANGNWVKRTET-------------------------YDYS 266
           +      TG+   K   ++DA+G    + +T                         Y+ +
Sbjct: 239 SAHGWPGTGSYVDKTKPILDADGKPTGKYQTVSFADKRCGEGNSLVTGPDGNQTCSYNAA 298

Query: 267 NDVYFQTPSERRSLFANMTQELGNDVVLTADAIYTNRRSNQQLAAQPAQIKLNVCGDPRV 326
            +       ER S F  +  EL  D+  T   + +   +  Q AA P      +      
Sbjct: 299 AESATMAAQERFSTFVKVDHELTEDINWTNRLMMSRVWTEGQYAAAPNSYSPKLRWTKEN 358

Query: 327 QDPTAGCLT-LDQGMIDAGIKADARGQ------VQYNRRMNDVGPRIYN-QDTDTWRLSA 378
            D     +       +   +K DA+G       +    R   +GPR+ N +DTD   L+A
Sbjct: 359 SDIYLATVNKYGNDYLKNQLKYDAKGNLIGGDTINLKMRTTPLGPRVTNVEDTDINFLTA 418

Query: 379 GLAGSLDVHTGMNWNVDYTFGKNEAKTGVDNSINATLMANSIYADPYAWFE-GSPLTDDM 437
            L G  D+  G  WN+   + +++  T      NA ++   +      +F  G+   +  
Sbjct: 419 -LEGHSDILGGTAWNLGAQWIRSDVTTIQTGLANANMIQEFLDNGKLDYFAAGTGYVEGS 477

Query: 438 KDVSYQQQS-----TGGNEQQTLSAGLNGELFDLSAGAVGFAIGAEYRRESGFYNPDPVV 492
            ++  Q+ +     TG  +   +  G + +LF+L AG V  AIG E+ R       D   
Sbjct: 478 NELQLQEAAHTGIFTGRVQTYGIDGGASFDLFELPAGTVPLAIGFEFMRTEYDKTNDAGS 537

Query: 493 VAGD--STAAQQDPTSGNYNVISIFEEVSVPFTEKLTGEFALRLDDYSTFGKATTWKIGL 550
             G+   T+   +    +  V+S   E   P  + L  E + R DDYS FG     K+GL
Sbjct: 538 NLGNIIGTSGGDNIQGKSREVLSFSAETMFPIIDGLDLELSARFDDYSDFGSTFNPKVGL 597

Query: 551 TYTATDELMVRTVAATGFRAPSVAELYGGNSGSF----DYLTNPWLPASEQTGQILVNRT 606
           +Y   D L+VR    TGFRAP+  +LY   S ++    D+   P  P      Q      
Sbjct: 598 SYRPVDSLLVRASYGTGFRAPTFDDLYATASETYLWARDWTQCPGNPNGCVQEQFKAQYQ 657

Query: 607 SDPDLKPEESESYTAGLVYSPSYIDGMSITLDYWRFKVTDAIARADVQVGLDACHAGDAE 666
            + DL+PEES S + GLV++ +  D +   L Y+  ++ + I+    Q  L+    G   
Sbjct: 658 GNDDLEPEESTSLSLGLVWNVT--DALDFELSYYDIQIDNVISTMSTQDVLNQERDGFDM 715

Query: 667 ACSTFNITADGDLFNLTSALTNVGSQDTSGIDFNLAYNFELFGLDWKVSNDTTYLIKFEQ 726
           +   F     G +  +     N+G   TSGIDFN+ Y  E    +++   +T Y++ +E 
Sbjct: 716 SNVLFRDPVTGKIDYVVLQKMNLGELKTSGIDFNIRYLLETSVGEFRFGAETNYVLSWES 775

Query: 727 DGENYTGTID--GNMGAYARVRNNFSISAGQDDWSVMYFNRYIRSMTDVYTDYDANDNPF 784
               Y+   D  G++G   + R N S +  Q +W    F RY    TD   D D    P 
Sbjct: 776 KDGPYSELEDIIGDVG-QPQFRANLSTTWTQGEWEASLFARY----TDSQEDEDYGKTP- 829

Query: 785 VAVRGVDSILYHNISGTYHVSDNTTVSLGVKNLTDEKPLYVTNGSDAGTVPQVYDTVGRT 844
                  S    +    Y++  N  V++G++NL DE+P    N    G    +YD +GR 
Sbjct: 830 -------SQWLLDAQAGYNLPWNAKVNVGIRNLLDEEPAMNENLGFPGYDTYLYDPIGRE 882

Query: 845 IYGGVTVKF 853
            Y     KF
Sbjct: 883 YYVRYNQKF 891