Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  107 bits (267), Expect = 3e-28
 Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 8/293 (2%)

Query: 11  MKHLITLHVMLDTLSVTASAERLCLSPSSVSKTLSQLRDSLNDELFYRNGNSLVATPLAK 70
           M  L+ L  +LD  SV  +A R+ LSP+++S+TL+++R+++ D +  R G  LV TP A 
Sbjct: 6   MNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIREAVGDPILVRAGRGLVPTPKAL 65

Query: 71  RLGPSVQQMINDMNQIM-SQDAFTPTNYEGHFSLAMRESTFELLAAKLSAHILSLAPHIH 129
           +L   V+ ++     +  S D    +     FS+   +    +   +L   +  LAP   
Sbjct: 66  QLQGQVRNVVEQAALLFRSADQVDLSTLRRRFSVRANDFFIGVYGGRLFDTMERLAPLCE 125

Query: 130 LDIYSKDNIGFDGLINGSLDFVLLPHDLSQPNPSQDDLVWETLFSDEMICLMNSSHPLAK 189
           L    + +   + L  G LD       +S   P+  ++  + LFS   + L    HPL  
Sbjct: 126 LCFVPEGDTDDEALREGRLDL-----RVSNTMPASPEVKVQNLFSTTFVGLAREDHPLFD 180

Query: 190 QSHISFDDYLSYSHIGITDTDLSTPYFDILLAQQSKKRAVPISVPDFGSAALMCHHSELL 249
           +  I+   + SYSHI I+   ++    D  L  Q  +R V +  P F  A  M   S+L+
Sbjct: 181 E-EITAARFASYSHISISRRGIARGPIDTALNAQGLERRVAMIAPGFHGAMFMLPDSDLI 239

Query: 250 FTCSRRWASIASQAK-GLTVKSLPIEYGKVAYSLVWHKQSMKDPALRWLYEQI 301
               +     A++ K  L   +LPI    +  +  WH +  KDPA +WL E +
Sbjct: 240 LPVPKEALLSANRLKLPLRAFALPISLPTLVLAQSWHPRFDKDPAHKWLRETL 292