Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 601 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

 Score =  461 bits (1185), Expect = e-134
 Identities = 253/599 (42%), Positives = 357/599 (59%), Gaps = 16/599 (2%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M  Y+APL D+RF+ +++      +  LP   +    D  +AILEE AK   Q++ PLNR
Sbjct: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPACQDATP-DMVDAILEEGAKFCEQVLAPLNR 59

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
            GD +G    ++ V TP G+K  Y Q+ +GGW  L  + E GG G+P+ LG+ V EM   
Sbjct: 60  VGDIEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGE 119

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           A  ++ +Y  L+ GA   I+ HG+   ++AYL KL SGEW G M +TEP  G+DL  +RT
Sbjct: 120 ANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGTMCLTEPHCGTDLGMLRT 179

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPE----SKGISLFLVPKITVNK 236
           +A PQ DG+Y +SG+KIFI+ G+HD+ +N++H+VLA+LP+    +KGISLF+VPK   N 
Sbjct: 180 KAEPQADGTYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNA 239

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
           DG +G  N V+ GS+EHKMG+ G+ATCVMNFD A G+LIG  N+GL CMFT MN  RL  
Sbjct: 240 DGSIGARNAVTCGSLEHKMGIHGNATCVMNFDAATGFLIGPANKGLNCMFTFMNTARLGT 299

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD--SDPIIVHGDVRRMLLTIRAMTE 354
            +QGL  A+  +Q    YA++R Q  +  G P   D  +DPIIVH DVRRMLLT++A  E
Sbjct: 300 ALQGLAHAEIGFQGGLKYARDRLQMRSLTG-PKAPDKAADPIIVHPDVRRMLLTMKAFAE 358

Query: 355 AGRALSVFTGKQLDLAKYAQDD-VKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGG 413
             RA+  FT KQ+D+ KY  DD  K +A   +  +TP+AKAF+T+ G ++     Q++GG
Sbjct: 359 GNRAMVYFTAKQVDIVKYGTDDEAKKQADGLLAFMTPIAKAFMTEVGFESANHGVQIYGG 418

Query: 414 HGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEF--VAELKAQMR 471
           HG+I E G+EQ VRD+RI+ +YEGT GIQA+D LGRKV       LK F  +     Q  
Sbjct: 419 HGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAN 478

Query: 472 EFTQVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYW-- 529
           E  +     +A + A       +   V    +     + A +VD+L   GY+   ++W  
Sbjct: 479 EGNEAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWAD 538

Query: 530 ---LAMLDKVPSAEDQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585
              LA         ++ F   K   A+FYF ++LP+   H+A + +G  + M M  E F
Sbjct: 539 MARLAAEKLAAGTTEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDF 597