Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 590 a.a., acyl-CoA dehydrogenase C-terminal domain-containing protein from Pseudomonas sp. SVBP6

 Score =  590 bits (1522), Expect = e-173
 Identities = 315/589 (53%), Positives = 391/589 (66%), Gaps = 7/589 (1%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M+ Y  PL DM FL  +VFD P  W+++P +AE VD DTA AILE+A K+ AQ + PLNR
Sbjct: 1   MSDYLPPLRDMDFLFNEVFDIPGQWARIPALAEQVDADTARAILEQAGKLIAQQVAPLNR 60

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
           +GDEQG   QD  V TP+G+   Y  Y+  GWVG+ G  E+GGMGMPK++   V+EM  +
Sbjct: 61  SGDEQGCRWQDGRVSTPDGFAQAYRNYADDGWVGVAGATEYGGMGMPKVIAAQVEEMLNA 120

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           A  +F LY  LTAGA L +  H SE LK  YLP +Y G W+G+M +TEP AG+DL  IR+
Sbjct: 121 ANLSFALYPMLTAGACLSLLNHASEALKARYLPPMYEGRWSGSMCLTEPHAGTDLGLIRS 180

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPE----SKGISLFLVPKITVNK 236
           RA PQ DGSY +SG+KIFITGG+ DLTEN+IHLVLAKLP+    +KGISLFLVPK+ V +
Sbjct: 181 RAEPQADGSYKVSGTKIFITGGEQDLTENIIHLVLAKLPDAPAGAKGISLFLVPKVLVEE 240

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
            G LG  N VS GSIEHKMG+K SATCVMNFD A GYL+GE N+GL  MFTMMNYERL +
Sbjct: 241 GGALGQANAVSCGSIEHKMGIKASATCVMNFDGAIGYLVGEANKGLNAMFTMMNYERLGV 300

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD-SDPIIVHGDVRRMLLTIRAMTEA 355
           GIQGL   + +YQ A  YA+ER Q  A+ G       +DPIIVH DVRRMLLT++A+ E 
Sbjct: 301 GIQGLALGERSYQNAVAYARERLQSRASTGPQAPEQAADPIIVHPDVRRMLLTMKALNEG 360

Query: 356 GRALSVFTGKQLDLAKYAQD-DVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGH 414
           GRA S +   QLDLAKY++D   + +A   V LLTPVAKAFLTD GL+ T+  QQVFGGH
Sbjct: 361 GRAFSTYVALQLDLAKYSEDAHERNRAEARVALLTPVAKAFLTDMGLETTVHGQQVFGGH 420

Query: 415 GYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFT 474
           GYIRE G EQL+RD RI QIYEGTNGIQA+D LGRK+  D   T      E+ A      
Sbjct: 421 GYIREWGQEQLIRDCRITQIYEGTNGIQALDLLGRKLVADGGRTYAALAQEINAFAEGLA 480

Query: 475 QVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYWLAMLD 534
              G   A +   +  L ++   V ++    P  I A AV++L  FGY++Y + W  M D
Sbjct: 481 PSRGEFKAPLQLAVANLDDLTAWVLDRAQGNPREIGAAAVEYLQVFGYTLYAYLWAQMAD 540

Query: 535 KVPSAEDQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAE 583
            V  A+D  F + K   A+FYF +LLP+     A V+AG  S   + AE
Sbjct: 541 -VALAQDGAFYQSKVGTARFYFARLLPRIRSLSASVKAGSQSLYLLEAE 588