Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 592 a.a., acyl-CoA dehydrogenase C-terminal domain-containing protein from Pseudomonas sp. SVBP6

 Score =  608 bits (1568), Expect = e-178
 Identities = 320/593 (53%), Positives = 406/593 (68%), Gaps = 9/593 (1%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M  Y+APL DMRF+L +VF+    W+QLP IAE VD DTA A+LEEA K++++ I PL+R
Sbjct: 1   MADYKAPLRDMRFVLNEVFEVSKLWAQLPGIAEAVDEDTALAVLEEAGKVTSKSIAPLSR 60

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
           +GDE+G    +  V TP G+   Y  Y++GGWVG+ G+P +GGMGMPK++   V+EM  S
Sbjct: 61  SGDEEGCHWDNGAVSTPAGFIEAYKTYAEGGWVGVGGDPAYGGMGMPKVISAQVEEMVNS 120

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           +  AF LY  LTAGA L INAH SE LK+ YLP +Y+G WAG+M +TEP AG+DL  IRT
Sbjct: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPES----KGISLFLVPKITVNK 236
           +A PQ DG Y +SG+KIFITGG+HDLTEN+IHLVLAKLP++    KGISLFLVPK  VN 
Sbjct: 181 KAEPQADGIYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNA 240

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
           DG LG  N  + GSIEHKMG++ SATCVMNFD+A GYL+GEPN+GL  MFTMMNYERL +
Sbjct: 241 DGSLGARNPANCGSIEHKMGIQASATCVMNFDDAVGYLVGEPNKGLAAMFTMMNYERLGV 300

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD--SDPIIVHGDVRRMLLTIRAMTE 354
           GIQGL SA+ +YQ A +YA++R Q  A  G P   D  +DPIIVH DVRRMLLT++A+ E
Sbjct: 301 GIQGLASAERSYQNAIEYARDRLQSRAPTG-PQAKDKVADPIIVHPDVRRMLLTMKALNE 359

Query: 355 AGRALSVFTGKQLDLAKYAQD-DVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGG 413
            GRA S +   QLD AK+++D D + +A   V LLTPVAKAFLTD GL++ +  QQVFGG
Sbjct: 360 GGRAFSTYVAMQLDTAKFSEDADTRKRAEELVALLTPVAKAFLTDLGLESAVHGQQVFGG 419

Query: 414 HGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREF 473
           HGYIRE G EQLVRD RI QIYEGTNGIQA+D +GRKV G   A  K F  E++      
Sbjct: 420 HGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVGSGGALYKLFADEIRHFTASA 479

Query: 474 TQVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYWLAML 533
               G  +  + A LD L ++   V ++    P  I A +V++L AFGY+ Y + W  M 
Sbjct: 480 GSDLGEFVKPLNAALDNLDDLTAWVLDRAKNNPNEIGAASVEYLQAFGYTAYAYMWALMA 539

Query: 534 DKVPSAE-DQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585
               + + + +F   K   A+FYF +LLP+     A V+AG  S   + A  F
Sbjct: 540 RTALAKQGEDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592