Pairwise Alignments

Query, 414 a.a., multidrug resistance protein D (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  144 bits (362), Expect = 6e-39
 Identities = 106/395 (26%), Positives = 188/395 (47%), Gaps = 11/395 (2%)

Query: 16  TPSAGSATRLLFMLVFMVACGQMAQTIFVPALPLIAQGLAVDASKLQAVMACYLLAYGLF 75
           T +   +  LLF+LV + A G+++  + +P L  I Q LA  A      ++ ++ A+GL 
Sbjct: 2   TNAPAPSRSLLFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLG 61

Query: 76  QFIYGPLSDRYGRKLPLLIGIGIFIIGALLATQATSFNQLICASLLQGLGTASAGALCRS 135
           Q ++GPLSDR GR+  L+ G+ ++ +  L           I A +LQGLG  +A  L R+
Sbjct: 62  QLLFGPLSDRIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLART 121

Query: 136 IPRDHYFGDNLLKFNSYVSMAVVFLPLVAPFLGSLASAYFGWQAVYWVLFGFGVFVWLLL 195
           + RD +  +      +   + +++  +VAP +G L   + GW+A   +    G  V L++
Sbjct: 122 VVRDVWKAEAGPAL-ALTMIGMLYAIVVAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVV 180

Query: 196 CFGFKES---LPKDKREQQPVLASYRHVLRHRSFRAYLFSLIATFAGIAAFEAIAGVLYG 252
              F+ES   L       + +   Y  +LR R +RA+  +L  T+  + A  A +  ++ 
Sbjct: 181 LLFFRESNHYLDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFI 240

Query: 253 QYLQLTPFMVSCYFVAPIPGYLLGALIAGR---QKQAQRSVFQGVALLGAGAL-FMLIPG 308
             L  +       F   +   ++G+    R   +   QR V  GVA++ AG +  ++I  
Sbjct: 241 NLLGFSSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYA 300

Query: 309 LFQL-VVGWSLLVGSILFFSGAGMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGAGLAA 367
           LF L V+G  + +  +    G G++ P   +  + P   +AG+A  L+G  Q FGA  + 
Sbjct: 301 LFGLSVLGLDIPIALVTL--GGGLVLPGSVTGGVMPNAHRAGLAAGLMGFAQMFGATCSG 358

Query: 368 LTMSLVPMGGQLSIGLLSAVMVLLVIVALHYARDQ 402
           + +SL+  G    + ++ A       VA H  R +
Sbjct: 359 VLLSLLRDGSATPMIVIQACFAATACVAFHLLRQR 393