Pairwise Alignments

Query, 414 a.a., multidrug resistance protein D (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 1e-32
 Identities = 100/380 (26%), Positives = 175/380 (46%), Gaps = 14/380 (3%)

Query: 19  AGSATRLLFMLVFMVAC--GQMAQTIFVPALPLIAQGLAVDASKLQAVMACYLLAYGLFQ 76
           AGS  R L   + ++ C  G     + +P+ P ++    VD  ++   ++ + +   + Q
Sbjct: 5   AGSLRRHLCSTLLILLCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQ 64

Query: 77  FIYGPLSDRYGRKLPLLIGIGIFIIGALLATQATSFNQLICASLLQGLGTASAGALCRSI 136
            + GPLSD  GRK  LL G+ + I+GAL    +T +   +   L+Q LG  S   L +++
Sbjct: 65  IVIGPLSDGIGRKRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQALGCGSL-VLGQAL 123

Query: 137 PRDHYFGDNLLKFNSYVSMAVVFLPLVAPFLGSLASAYFGWQAVYWVLFGFGVFVWLLLC 196
            +D Y G         ++ A      ++P  G+     FGW+A + V       V LL C
Sbjct: 124 VQDLYSGTQRNAMRILLTSASGLFISLSPLAGAFLQQSFGWEASFTVFVIIAAIVSLLSC 183

Query: 197 FGFKESLPKDKREQQPVLASYRHVLRHRSFRAYLFSLIATFAGIAAFEAIAGVLYGQYLQ 256
               ++      ++ P ++SYR +LR   + A+       FA   +F  IA +L    L+
Sbjct: 184 VLLHDT--PASHDRAPSMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPLLLMGRLE 241

Query: 257 LTPFMVSCYFVAPIPGYLLGALIA---GRQKQAQRSVFQGVALLGAGALFMLIPGLFQLV 313
           LT +  S  F+     Y++G + A     +   Q  +  G+ L+    + +L   +++ V
Sbjct: 242 LTAYQFSLVFIGYGLAYIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLL---MWEWV 298

Query: 314 VGWSL---LVGSILFFSGAGMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGAGLAALTM 370
            G S+   L+  I+  +G  ++ P  T+ AL  +PRQAG A +L   L   GAGL +  +
Sbjct: 299 AGLSVLGALLPMIVCTTGTTLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVV 358

Query: 371 SLVPMGGQLSIGLLSAVMVL 390
           + +       +G+L  V  L
Sbjct: 359 AGLESELPAGLGVLFMVASL 378