Pairwise Alignments

Query, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., Universal stress protein family from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 13/309 (4%)

Query: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREAM 60
           M+  Q++L++  P         RA  LA      + +    +        +++ Q    M
Sbjct: 1   METPQRLLLIASPLMRRTPVYDRAAALAKAKGMALHIVAFDYVEGLATAGLVNDQALAVM 60

Query: 61  RQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHAHD 120
           R+G + Q   W++    P    G+ + T+V+W  +P   I+ H     + +++K      
Sbjct: 61  REGYVQQHREWLETQALPMRRNGVTVTTEVVWVQQPLNEILIHLREQPFAMLIKELEHEP 120

Query: 121 KLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTDHQMLNGKIIEHA 180
                +FT  D  L+R+  +P+ +V         ++L AV+++  +   +  N +II  A
Sbjct: 121 WWMRAMFTSLDIQLLRETRIPLHLVHKASHALPRRVLAAVDLSRPEDQFEGFNDQIISEA 180

Query: 181 KDLAGKFAAEVHLVNGF--------PGTPVNLAIELPDFDAQTYNDTIRLQHEQRVQYLA 232
             L  +  A++ L+  +         G     +      DAQT +D          Q LA
Sbjct: 181 LKLTLQCNAQIELLYAYDLGSMYLDAGGSREHSFLFDSNDAQTLHDA----QSAAFQELA 236

Query: 233 DAYGIDKQNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSIN 292
           +  GI  ++ H++ G P   +    +  D +++++G+    G     IG+TAE V+  ++
Sbjct: 237 ERNGIAVEHRHMRIGDPAKALAMFMDNNDIDVLVMGSYHHRGI-GWFIGSTAERVMHRLS 295

Query: 293 CDLLAIKPD 301
             +L I P+
Sbjct: 296 SSVLVISPE 304