Pairwise Alignments

Query, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., Universal stress protein family from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 3e-27
 Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 4/299 (1%)

Query: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREAM 60
           M  Y ++L++  P      AL RA  L+S + A  T+ L          + L    R+  
Sbjct: 1   MNTYSRLLLICHPDLHPSPALTRAQALSSATGA--TLHLVALSQLPSRLATLDQVLRKNA 58

Query: 61  RQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHAHD 120
           R+   + R AW+ + +     LG+    + +    P + +I  A   +  +++K      
Sbjct: 59  RKQDAEHRKAWLAEQVKALGELGITAYAETLDDQDPLKDLIRLAQLHRVGMVIKDIQHET 118

Query: 121 KLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTDHQMLNGKIIEHA 180
            L   + TP DW L+R+ P+ + +V   +     +IL AV++   D     LN  I++ A
Sbjct: 119 ALSRALLTPLDWQLLRRCPIQLHLVAQAETTLPARILVAVDLVEHDPLIDKLNDHILQSA 178

Query: 181 KDLAGKFAAEVHLVNGF-PGTPVNLAIELPDFDAQTYNDTIRLQHEQRVQYLADAYGIDK 239
            +LA +  A++HL+  + P          P        + +  +  +R+      YGI  
Sbjct: 179 LELAQRCKAQLHLLQAYEPSASFVAYAAAPVAWTDKLAEEMSGRARERMATFGGRYGIKP 238

Query: 240 QNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLAI 298
            + H+  G   +V+ E A Q   ++V++GT+   G S  ++G+T E  +  I+  +LAI
Sbjct: 239 DHLHLVRGAARNVVSEYANQQGFDVVVMGTLYHEGVS-KVVGSTTEQTLYKIHSSILAI 296