Pairwise Alignments

Query, 646 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 574 a.a., methyl-accepting chemotaxis protein from Rhodanobacter sp000427505 FW510-R12

 Score =  235 bits (599), Expect = 5e-66
 Identities = 159/497 (31%), Positives = 275/497 (55%), Gaps = 59/497 (11%)

Query: 153 SDAMHQSFNKG----QIEVAYRAGSVLESVLSARLAAS---------KFLETNLDADLQQ 199
           ++ +  S+ +G    Q+    RA S++  V+    A +         K  E+     LQQ
Sbjct: 48  NEGLRHSYEEGMVPAQLMATLRARSLMNFVVLGEAAGAIKKPDQVRQKVAESE---KLQQ 104

Query: 200 ALMAIDLAKGERLSALKAAATDLDTQSKLVQFTSSIDNYASSLKSVYNTINERNDIVKNQ 259
            +  ID    ++LSAL  +       +K   + ++   Y S LK +Y+ + + ++   + 
Sbjct: 105 EVAGID----KQLSALPMSP---QIAAKYKAYRATDAEYESGLKDIYDALRQADEGTSDL 157

Query: 260 LDRIGLDVSRQTEDIKLTIQKRQDALGPLVKVQNEQTLTT----------VISVSIAAIF 309
           L+            ++  +  R D L  L + Q+++   T          V  + +AA+ 
Sbjct: 158 LEM----------QVRPQLMLRVDTLDKLTQAQSDEVKQTYQTQVGRYKVVRLLVLAALI 207

Query: 310 IGIFLAWFLVKLIKKPLGGEPRDMETIARAIANGDL--TIELKQREQATGVYKAMIDMID 367
            G+ LA  +  L+ + + G    +  +A AI+ G L   I + + ++   + +A   M +
Sbjct: 208 GGLLLALLVSTLLVRSISGTLAHVVKVAHAISEGQLGHAIRVGRHDELGRLLEAFRVMDE 267

Query: 368 SLTSVIAQVRSGADNLSSASSQVSSTAQSLSQGATEQAASVEETTSAVEELNASVQQNSE 427
            L +++ +VR G+D +SSA+ Q++     LSQ   EQA+S+EET S++EE+ ++V+QN+E
Sbjct: 268 RLGAIVGEVRHGSDAVSSAAQQIARGNDDLSQRTQEQASSLEETASSMEEMTSTVKQNAE 327

Query: 428 NARVTNNMATVAAEEARQGGIAVEQTVAAMKQIAAK-------ISLIEDIAYKTNLLSLN 480
           NA   N +A  A E+A +GG    + +AAM +I A        + LI++IA++TNLL+LN
Sbjct: 328 NASHANQLARGAREQAERGGEVAGKAIAAMGEIDASSRKIGDIVGLIQEIAFQTNLLALN 387

Query: 481 AAIEAARAGEHGKGFTVVASEVRKLAENSSLTAQEINKLASDS-------VGIAENAGRL 533
           AA+EAARAGE G+GF VVASEVR LA+ S+  A+EI  L ++S         +   +G+ 
Sbjct: 388 AAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKGLIAESEEKVKSGSELVNQSGKA 447

Query: 534 IANIVPNIQKTSDLVQEISSSSEEQAIGISQINDSMLQLDKATQQNASASEELAATSEEL 593
           +A IV +++K +D+V EI+++S+EQ+ GI Q+N++++Q+D+ TQQNA+  EE +A +  +
Sbjct: 448 LAEIVESVKKVTDIVAEIAAASQEQSAGIDQVNNAVMQMDEMTQQNAALVEEASAAARAM 507

Query: 594 NGQANQLLDAVEFFKLA 610
             QA +L + V FF LA
Sbjct: 508 QEQAGELSEQVGFFHLA 524



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 84/390 (21%), Positives = 150/390 (38%), Gaps = 53/390 (13%)

Query: 137 VTNVLVPNGSEVVKLISDAMHQSFNKGQIEVAYRAGSVLESVLSARLAASKFLETNLDAD 196
           V+ +LV + S  +  +    H + ++GQ+  A R G   E  L   L A + ++  L A 
Sbjct: 216 VSTLLVRSISGTLAHVVKVAH-AISEGQLGHAIRVGRHDE--LGRLLEAFRVMDERLGAI 272

Query: 197 LQQALMAIDLAKGERLSALKAAATDLDTQSKLVQFTSSIDNYASSLKSVYNTI--NERND 254
           + +     D       +A + A  + D   +  +  SS++  ASS++ + +T+  N  N 
Sbjct: 273 VGEVRHGSDAVSS---AAQQIARGNDDLSQRTQEQASSLEETASSMEEMTSTVKQNAENA 329

Query: 255 IVKNQLDR-------IGLDVSRQTEDIKLTIQKRQDALGPLVKVQNEQTLTTVISVSIAA 307
              NQL R        G +V+ +       I      +G +V +  E    T +    AA
Sbjct: 330 SHANQLARGAREQAERGGEVAGKAIAAMGEIDASSRKIGDIVGLIQEIAFQTNLLALNAA 389

Query: 308 IFIGIFLAWFLVKLIKKPLGGEPRDMETIARAIANGDLTIELKQREQATGVYKAMIDMID 367
           +                  G + R    +A  + +      L QR  + G  K +  +I 
Sbjct: 390 VEAA-------------RAGEQGRGFAVVASEVRS------LAQR--SAGAAKEIKGLI- 427

Query: 368 SLTSVIAQVRSGADNLSSASSQVSSTAQSLSQGATEQAASVEETTSAVEELNASVQQNSE 427
                        + + S S  V+ + ++L+    E   SV++ T  V E+ A+ Q+ S 
Sbjct: 428 ---------AESEEKVKSGSELVNQSGKALA----EIVESVKKVTDIVAEIAAASQEQSA 474

Query: 428 NARVTNNMATVAAEEARQGGIAVEQTVAAMKQIAAKISLIEDIAYKTNLLSLNAAIEAA- 486
                NN      E  +Q    VE+  AA + +  +   + +     +L    AA EAA 
Sbjct: 475 GIDQVNNAVMQMDEMTQQNAALVEEASAAARAMQEQAGELSEQVGFFHLAGDGAAKEAAP 534

Query: 487 --RAGEHGKGFTVVASEVRKLAENSSLTAQ 514
             RA +  +    V + VRK     +  A+
Sbjct: 535 QDRAKDVSRATEAVFAAVRKTPPRMASAAE 564