Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 441 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 1e-37
 Identities = 120/427 (28%), Positives = 183/427 (42%), Gaps = 30/427 (7%)

Query: 16  KYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIGD 75
           +Y+ LV      I + E+P G +LP  R+LA   G+ + T +R Y   E  G V    G 
Sbjct: 5   RYKSLVDTFAAAIRRGEMPPGMRLPTHRQLAADHGLALVTASRVYTELEAMGLVSGETGR 64

Query: 76  GTYVNASPVPE------------MANLQLNMATCQQPLTDQISTLSDCLSLLAKDPTKLS 123
           GT+V    +P             M +L  N       L  Q   L   L  LA     L 
Sbjct: 65  GTFVREISLPPGQGSGQMTVTAGMLDLNFNYPA----LPGQADLLRTALRQLALSGD-LE 119

Query: 124 QLLGYRANPLDQHQQT-FHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLH 182
            LL Y+ +    H++  F   L  RG+    EQ++ T G Q  +   + A L  GDV+  
Sbjct: 120 ALLRYQPHAGRLHERAAFARHLLSRGLTVDPEQVLLTSGAQHGLAVTMMALLKPGDVIAV 179

Query: 183 EQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQY 242
           +   Y G ++ A+ L +  + +P+T  G DL   + L +    + +Y      NP     
Sbjct: 180 DALTYSGFKVLAETLHLEIVAIPVTPTGPDLEALQNLCRKRPVRAVYSMPTLHNPLGWVM 239

Query: 243 SEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKLFSG 302
              QR++L+ +A+Q+   IIED     L E    P+  LA     +R +Y+  LSK  + 
Sbjct: 240 DLAQRERLVSIARQHNLMIIEDAAYAFLAENAPPPVATLAP----ERTVYVGGLSKSVAT 295

Query: 303 GLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGHITANRDAIIRERQQQC 362
           GLR GF+  P   +  L  AI +  W V  +   +A   I+ G + A  +A  RE  Q  
Sbjct: 296 GLRVGFVAAPSDWVKTLERAIMATTWNVPGVMSAVAVAWIEDGTV-AQLEAQKREDAQAR 354

Query: 363 IALGQR----LGLTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDF--NCH-DN 415
            AL  R    L  T        W+ L ED +A  +   L    + +   + F  + H  +
Sbjct: 355 QALAARVLKGLAYTSHPSSYFLWLPLAEDARADQVAMTLQRDNISVSTAEPFAVSAHVPH 414

Query: 416 FIRLSLG 422
            +RL+LG
Sbjct: 415 ALRLALG 421