Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 466 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 5e-39
 Identities = 121/450 (26%), Positives = 202/450 (44%), Gaps = 34/450 (7%)

Query: 16  KYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIGD 75
           KY+ LV AI   I Q +L    +LPPQR++ADALG+++ TVT AY   E++G V   +G 
Sbjct: 18  KYKILVQAISSDIEQHKLADDQRLPPQRQVADALGISVQTVTNAYKELERQGLVRCEVGR 77

Query: 76  GTYVNAS----------PVPEMANLQLNMATCQQPLTDQISTLSDCLSLLAKDPTKLSQL 125
           G++V+              PE A + L+ A               C  L  +      +L
Sbjct: 78  GSFVSRRMSDRVASYILDAPERALVDLSTARIIHTPEHDRYWRETCAELANEVDQSWIRL 137

Query: 126 LGYRANPLDQHQQTFHHWLKQRGIEQQS-EQLIFTHGGQQAIFACLNAFLTKGDVLLHEQ 184
               A   D H+    HWL + G+   + E ++ T+G    +F  L +     D++L E 
Sbjct: 138 CRPVAG-FDAHRDAACHWLGRLGLPGLAREDVLITNGAAHGLFLALASLAGPDDLVLCEG 196

Query: 185 YCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSE 244
               G+   ++ LG N  G+    +G+D   FE +    R   +  T N  NPT      
Sbjct: 197 MTDHGVIGNSQVLGFNLKGLDTDRDGIDPEHFEDICSNERVTALVCTPNLNNPTSALMPN 256

Query: 245 QQRQQLLELAQQYQFYIIEDDVNYCLPEEWHS-PLWQLAQVLNIQRVIYISSLSKLFSGG 303
            +R+++  +A+++  +IIEDDV   L  ++   P+   A  L+     Y +S++K    G
Sbjct: 257 SRRKEIASIARRFGVHIIEDDVYGPLLNQYEGPPISSYAPELS----FYCTSMTKSVLTG 312

Query: 304 LRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGHITANRDAIIR------E 357
           LR GF+ VP+ L       +    WM +P+  E+A + I  G      D +I+      E
Sbjct: 313 LRIGFLKVPKRLALRTESILRVTSWMAAPMLAEVAARWIMDG----RADTLIQLQRRLLE 368

Query: 358 RQQQCIA--LGQRLGLTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDFNCHD- 414
            +Q+ +A  +G+ L    R   LN W+ +P       LV  L  + + +   + F     
Sbjct: 369 TRQKLVADEMGRYL-YCHRPHSLNAWLNVPAHWDVSSLVRTLRQQHIAVTSPEPFTVRGV 427

Query: 415 ---NFIRLSLGGAENDTQFRLAIECIESTF 441
                IRL +G   ++++   A++ +  TF
Sbjct: 428 TPARGIRLCIGAETSESELSQALKTMRMTF 457