Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 460 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  111 bits (277), Expect = 6e-29
 Identities = 110/434 (25%), Positives = 180/434 (41%), Gaps = 45/434 (10%)

Query: 14  GPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARI 73
           G + + ++  I+  I  +    G ++P  R +A  + V++ TV  AY      G + +R 
Sbjct: 5   GTRIRTVMGEIQSRIASRTYTPGARIPSVRAMAQTMQVSVSTVLEAYERLMAEGVLNSRP 64

Query: 74  GDGTYVNASPVPEMANLQLNMATCQQ--PL---TDQISTLSDCL---------------- 112
           G G YV A PV  +   +L     ++  PL      + T SD L                
Sbjct: 65  GSGFYV-AGPVAPLVLTELGPRLDREVDPLWISRQSLDTASDALKPGCGWLPASWMFEAG 123

Query: 113 ------SLLAKDPTKLSQLLGYRANPLDQH--QQTFHHWLKQRGIEQQSEQLIFTHGGQQ 164
                 ++   D +KL++     A+PL     +Q     L   GIE   EQ++ T  G  
Sbjct: 124 LRKALRTVARSDTSKLTEY----ASPLGHLPLRQFLSRKLTGIGIEAPLEQIMLTESGTH 179

Query: 165 AIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHR 224
           AI       L  GD +L +  CY       K   +N +GVP T+ G D+  F A +  H 
Sbjct: 180 AIDLICRFLLEPGDTVLVDDPCYFNFHALLKAHRVNIVGVPYTATGPDIDAFGAALLAHS 239

Query: 225 PKLIYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQV 284
           P+L        NPT    S     +LL+LA      I+EDD+     +  ++P  +L+  
Sbjct: 240 PRLYITNSGIHNPTGATLSPVTAHRLLKLADNSSLVIVEDDI---FGDFENAPAPRLSAF 296

Query: 285 LNIQRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKR 344
             + RVI I S SK  S  +R G+I      I +L     +  +    L  ++    I  
Sbjct: 297 DGLSRVIQIGSFSKTISASIRCGYIAARSDWIESLVDLKIATTFGGGRLAADIIHLAITD 356

Query: 345 GHITANRDAI---IRERQQQCIALGQRLGLTQRW----RGLNGWIQLPEDIKAHHLVTAL 397
                + +++   + E   + +A  Q +G+ + W     G+  W QLP+   A  L  A 
Sbjct: 357 SGYRKHMESVRLRLAEAMDRTVARLQAIGI-KPWITPQSGMYVWCQLPQGKDAATLARAC 415

Query: 398 AAKGVLIRHGDDFN 411
             +GV++  G+ F+
Sbjct: 416 LNEGVVLAPGNAFS 429