Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 525 a.a., PLP-dependent aminotransferase family protein from Paraburkholderia sabiae LMG 24235

 Score =  107 bits (266), Expect = 1e-27
 Identities = 118/455 (25%), Positives = 191/455 (41%), Gaps = 69/455 (15%)

Query: 15  PKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIG 74
           P Y++++  ++Q IL  +L  G KLP  R LA  LG+   TV   Y      GYV +  G
Sbjct: 21  PVYRQVLELMQQAILTGQLLPGAKLPSSRVLASDLGIARNTVLHVYDQLTAEGYVISTTG 80

Query: 75  DGTYV----------NASPVPEMANLQLN------------MATCQQPLTDQIST----- 107
            GTYV          NA  VP  A+  +             +A    P    +ST     
Sbjct: 81  SGTYVADTRPDTTAVNARKVPPAASGSIGASGVAGTIATAGVAQSAAPAQGGLSTRGARL 140

Query: 108 -----------------LSDCLSLLAKDPTKLSQLLGYRANP----------LDQHQQTF 140
                            + D     A+  ++L   L   ANP              ++  
Sbjct: 141 IRQAGVSAKQWGAFMPGVPDVAEFPARTWSRLQAKLWKEANPDLLTYAPGGGYRPLRRAL 200

Query: 141 HHWLK-QRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLGI 199
             +L+  R ++   +Q+I T G  Q+I   +      GD    E+ CY G R   +  G+
Sbjct: 201 SDYLRVARSVKCTPDQIIITTGIHQSIDLAVRLLTDVGDRAWVEEPCYWGARSVLQSSGL 260

Query: 200 NSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQRQQLLELAQQYQF 259
               VP+  EG++    E+ +Q   P++  +T ++Q P  +  S  +R+ LLE A+Q+  
Sbjct: 261 TLAPVPVDEEGLN--PRESDLQ-SPPRIALVTPSHQYPLGMVMSLARRRTLLEYARQHGV 317

Query: 260 YIIEDDVNYCLPEEWHS-PLWQLAQVLNIQRVIYISSLSKLFSGGLRQGFILVPEPLIAA 318
           +IIEDD  Y     + S PL  L  + +  +VIY+ SL K+   GLR G+++ PE L+  
Sbjct: 318 WIIEDD--YDSEFRYGSRPLASLQGLDDAGQVIYVGSLGKMLFPGLRIGYMIAPEHLVDT 375

Query: 319 LRLAIHSQCWMVSPLNVELACQLIKRGHITAN---RDAIIRERQQQCI-----ALGQRLG 370
            R  +         +   +  + I  G++T++     A+  ER+Q  I       G  L 
Sbjct: 376 FRTGVAELYREGQLMQQAVLTEFIMDGYLTSHVRRMRALYGERRQILIDAITSRFGDTLP 435

Query: 371 LTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIR 405
           +     GL+  + LP+D     +  A    GV++R
Sbjct: 436 VMGDEAGLHLVLGLPDDANDREVTAASYDAGVIVR 470