Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 473 a.a., PLP-dependent aminotransferase family protein from Paraburkholderia sabiae LMG 24235

 Score =  147 bits (372), Expect = 6e-40
 Identities = 124/457 (27%), Positives = 203/457 (44%), Gaps = 34/457 (7%)

Query: 13  VGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEAR 72
           V  KY+RLV AI   I  + L  G +LPPQR +A  L V++ TVT AY   E++G +   
Sbjct: 23  VESKYKRLVKAIASDIESESLRAGARLPPQRDVASELSVSVQTVTNAYKELERQGLIRCE 82

Query: 73  IGDGTYVNASPVPEMANLQLNMATCQQPLTD----QISTLSDCLSLLAKDPTKLSQLLGY 128
           +G G++V       M+N  L+  T ++ + D    +I    +  ++  K    LS++   
Sbjct: 83  VGRGSFVAERVTETMSNYMLD--TAERSVVDFSIARIIHTPEHDAMWRKVCATLSKIEDQ 140

Query: 129 ---RA-NPL---DQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLL 181
              RA  P+   + H+Q    WL+  G+    + L+ T+G    IF  L + +  GD +L
Sbjct: 141 PWIRAFRPIAGFEHHRQAGIAWLQSMGMPASMDTLLVTNGAAHGIFLALASLVGPGDTVL 200

Query: 182 HEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQ 241
            E     G+   A  LG    G+ +   G+    FE +    R   +  T    NPT   
Sbjct: 201 CESLTDHGVIGSANVLGFTLKGLEIDEYGIHPEHFEEMCDSERITALVCTPTLNNPTVAM 260

Query: 242 YSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKLFS 301
             E +R+ +  +A++Y  ++IEDDV   LP    +P+      L+     Y +S+SK   
Sbjct: 261 MPESRRRSIARIAERYGVFVIEDDVYGPLPTTRPAPISSHIPDLS----FYCTSMSKSVL 316

Query: 302 GGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGHITANRDAIIRERQQQ 361
            GLR G++  P  L       +    WM +    E+A + I  G  TA R   + E Q++
Sbjct: 317 AGLRIGYMTTPRRLALRAESVLRVSSWMATSPMAEVATRWINDG--TAAR---LVETQRE 371

Query: 362 CIALGQRLG--------LTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDFNC- 412
            +A+ Q L         L    + L+ W+++P   +A  L   L  + + +   D F   
Sbjct: 372 RLAIRQALAQKVLGQYVLGSHPQALSVWLRVPNHWQADRLARELRNRNIAVTSPDPFLVR 431

Query: 413 ---HDNFIRLSLGGAENDTQFRLAIECIESTFNALKQ 446
                N +RL +G   +D  +  A+E +   F    Q
Sbjct: 432 GAERPNAVRLCVGAEVSDEVYEEALETMRDVFEQYPQ 468