Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 476 a.a., PLP-dependent aminotransferase family protein from Paraburkholderia sabiae LMG 24235

 Score =  194 bits (492), Expect = 7e-54
 Identities = 141/461 (30%), Positives = 218/461 (47%), Gaps = 30/461 (6%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           W+P ++    PKYQ +  A  Q IL  +LP G KLPP R LA  L VT GT++RAYA  E
Sbjct: 6   WLPRIEAGSEPKYQVIARAFAQAILNGQLPAGEKLPPHRSLASELRVTTGTISRAYAELE 65

Query: 65  QRGYVEARIGDGTYV---NASPVPEMANLQLNM---ATCQQPL----------TDQISTL 108
           ++G   AR+GDGTYV    +  +P +AN    +   A    PL          T++ + L
Sbjct: 66  RQGLANARVGDGTYVAQARSRELPPVANGYTMLRPGAASAPPLIDLGQNVPQSTEEAAAL 125

Query: 109 SDCLSLLAKDPTKLSQLLGYRANPLD-QHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIF 167
           S  L+ +A D    ++LL Y       +H+     WL + G    + +++ T G Q A+ 
Sbjct: 126 SVTLADIATDQRLTAELLQYAPEAGSMRHRLAGAAWLGRAGSPASASRVLVTQGAQHALA 185

Query: 168 ACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKL 227
           + L A    GD +L E   YPGI   A+QL ++ +GV +  EG+     E   +   P+ 
Sbjct: 186 SVLRAVTRPGDTVLAEVVSYPGIIALARQLRLHLVGVEIDQEGLVPAALELACKSLHPRA 245

Query: 228 IYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNI 287
           I+      NPT    S ++R  + E+ Q++   +IED V   L E    PL     V   
Sbjct: 246 IFCVPTIHNPTTATMSAERRDAVAEILQRHGVLLIEDIVPAMLLETPPEPL----AVRMP 301

Query: 288 QRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGHI 347
           ++   I+ LSK  + GLR G++  P    + +   I S CWM +PL  E+  + I+ G +
Sbjct: 302 EQAFLIAGLSKSVAPGLRVGYLQAPSAWCSKIAAVIRSDCWMTAPLMAEIVSRWIESGEM 361

Query: 348 TANRDAIIRER--QQQCIALGQRLGLTQRWRGLNG--WIQLPEDIKAHHLVTALAAKGVL 403
               +A+ R R   +  +A      +  R    +   W+ LPE  +A     AL  +GVL
Sbjct: 362 D-RLNALQRARIDAEHAVANDALTDVAYRQAPTSSHLWLPLPEPWRAAEFAAALRQEGVL 420

Query: 404 IRHGDDF----NCHDNFIRLSLGGAENDTQFRLAIECIEST 440
           ++  D F    N   + IR+ + GA +       +  I +T
Sbjct: 421 VKTADSFVIGRNAAPHAIRICMSGATSLDALARGLSLIRTT 461