Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 507 a.a., PLP-dependent aminotransferase family protein from Pectobacterium carotovorum WPP14

 Score =  111 bits (277), Expect = 6e-29
 Identities = 116/457 (25%), Positives = 184/457 (40%), Gaps = 76/457 (16%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           WI D      P + R+  AI Q IL   L  G  LP  R LA +LGV+  TV  AY+   
Sbjct: 13  WIGDPAHGALPLHARIQRAIRQLILDGILDVGKSLPASRALATSLGVSRDTVESAYSQLH 72

Query: 65  QRGYVEARIGDGTYVN-------------------------------------------- 80
             G++E R+G G++V+                                            
Sbjct: 73  AEGFIERRVGSGSFVSERAKRLSGRGKARKAGDSKAELRLSQRGSAMFQNGGVRDFIVPR 132

Query: 81  --ASPVPEMANLQLNMATCQQPLTDQISTLSDCLSLLAKDPTKLSQLLGYRANPLDQHQQ 138
             A  VPE  N  L      + L  Q+       +LL   P  +  L    A+ ++    
Sbjct: 133 AFAPGVPETRNFPLQT---WERLERQVLKAYGTQALLHSPPQGMEALRRAIADYVNL--- 186

Query: 139 TFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLG 198
                  +RG     ++++     QQA+  C N  +  GD +  E   Y G R   +  G
Sbjct: 187 -------ERGARATPDRVLVLTSSQQALTLCANVLMDAGDRIFLEDPVYHGARKAFEAAG 239

Query: 199 INSIGVPLTSEGVDLVR-FEALVQIHRP-KLIYLTLNNQNPTCIQYSEQQRQQLLELAQQ 256
           +  + +PL ++G+ + R  EA    H P K ++LT ++Q PT    +  +R  ++E A+Q
Sbjct: 240 LACVPIPLDADGLQVDRLLEASSDHHTPAKAVFLTPSHQFPTGATLALDRRLAVIEWARQ 299

Query: 257 YQFYIIEDDVNYCLPEEWHSPLWQLAQVLNI---QRVIYISSLSKLFSGGLRQGFILVPE 313
           +Q +IIEDD +     E+H      A V  +    R IYI + +K    GLR G++++P+
Sbjct: 300 HQSWIIEDDYD----SEFHYAGKPTACVQGLDPHDRTIYIGTFTKSLFPGLRIGYMILPQ 355

Query: 314 PLIAALRLAIHSQCWMVSPLNVELACQLIKRGHITAN----RDAIIRERQQQCIALGQRL 369
           PL+A + +         +P+      + I+ GH  A+    R      R      + Q L
Sbjct: 356 PLVAPMTVGRTLMDGHSAPIPQLTLARFIEGGHFGAHVRTMRTVYAERRDVLARLVRQHL 415

Query: 370 GLTQRWRGLNGWIQLP----EDIKAHHLVTALAAKGV 402
                 R   G +Q+P     DI  H  V +    G+
Sbjct: 416 ADFVEPRVPAGGMQMPCIFIRDIPEHDAVESARRAGI 452