Pairwise Alignments

Query, 416 a.a., lipoprotein releasing system transmembrane protein LolC, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 407 a.a., ABC transporter permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 75/404 (18%), Positives = 173/404 (42%), Gaps = 14/404 (3%)

Query: 9   IGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLLGVISQADV 68
           I  R++ +R+  + IS IS  +  G+A+G A LIIVLS  NG E  + +          V
Sbjct: 7   IAKRYFFSRKKRNIISIISNIAMIGVAVGSAALIIVLSVFNGLEDLIRELYSSFDPDLKV 66

Query: 69  VGVNEPIADWRAVEQTALQ-IEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDPEQEAKVS 127
                   +        ++   G+   +  I    L++       + + G+  E   + +
Sbjct: 67  TAAEGKSFETDTEFMNRIRHTPGVAVVSEVIEDNALLRYNDRQMVVKMKGVS-ENFFEQN 125

Query: 128 TLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLA----LYVQDLDPEHAGSLRA 183
            +   +   +     ++    ++G  +  +L +   +       LY +++         +
Sbjct: 126 EIDSAVVEGSSDLYMKNAYRALVGRGVQYQLSIHPSNQFVPLQFLYPRNVKFNPLNPEGS 185

Query: 184 AKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVTQVFEAPAKIREL 243
             +   +  G++ +  + +    ++P+ +A  +L   +  T + + V + F+     + L
Sbjct: 186 FNNLNILPGGIFAIERQYDDAYVFVPLNFAEELLEYGRRRTALELKVERGFKVEQVKKAL 245

Query: 244 GYALNQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAVRDKASE 303
              L +   + +       L + +++ +  +++    ++G+A  NI  +L M V DK  +
Sbjct: 246 QQMLGEGFKVQNSDEQHTSLLRAVKVEKLFVFITFAFILGIASLNIFFSLSMLVIDKKKD 305

Query: 304 IAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQLLGIQLL 363
           IAIL +MG +  ++  IF+++GAL   +G A G        + L  +  +++Q  G+  +
Sbjct: 306 IAILASMGATAKTIRNIFLLEGALVACIGAAYG--------LTLGMLICNLQQTFGLVSM 357

Query: 364 SADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRI 407
                 V+  P ++ + D  L      +++L+ ++ PA KA+ +
Sbjct: 358 GMATSVVEAYPVKMEIEDFVLTGLAIIIITLLVSIRPANKAAAL 401