Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolC from Magnetospirillum magneticum AMB-1

 Score =  216 bits (550), Expect = 1e-60
 Identities = 142/417 (34%), Positives = 228/417 (54%), Gaps = 19/417 (4%)

Query: 5   FPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVP 64
           F   V +RY RAR+   F S I  F+++GI LGVA LIVV +VMNG   +L  RILG   
Sbjct: 6   FERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRILGING 65

Query: 65  QLTVY-TKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAE 123
            + VY + APLS +   A+ +  LPGV  V P+   Q    S+       V GV  +  +
Sbjct: 66  HIGVYGSGAPLSGYDPLADSIRKLPGVTRVIPTAEGQVFATSSGGGTGAIVRGVRGQ--D 123

Query: 124 KLSA-VAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVP 182
            L+  V Q  Y G  ++  +G   V++G  LA +L V  GD++ L+S  G V +  G VP
Sbjct: 124 LLTRPVFQKKYRGNPADF-AGDDAVVIGKRLADKLGVRIGDSISLISPKGNV-TAFGTVP 181

Query: 183 SQRKFLVSAVFEMGS-QVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKD 241
             R + V   F++G  + D+G  ++  + A+   R P +++ Q+ ++L +P   P   K 
Sbjct: 182 RMRGYRVVGTFDVGMFEYDSGFIFMPLEAAQTYFRLP-EQVTQIEVFLENPDMVPETRKA 240

Query: 242 VQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVD 301
           +  +    G  AT  DW+    + F+A+++E+N+M L+L+LI+ VAAFNI+S+L+M+V D
Sbjct: 241 IWDLT---GTTATIYDWQQANANFFNAIQVERNVMFLILTLIILVAAFNIISSLIMLVKD 297

Query: 302 KTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNG----LMATLG 357
           K  D+A+L+T G     ++ IF + G    V+G   G V+G+    N+      + + +G
Sbjct: 298 KGRDIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTVLGVAFATNIENIRQFIQSIIG 357

Query: 358 ISILGAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
             +  A       LP ++   ++  +++  L ++  AT+YPA RAA++ P  ALRYE
Sbjct: 358 RELFAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALRYE 414