Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., lipoprotein-releasing ABC transporter permease subunit LolE from Serratia liquefaciens MT49

 Score =  217 bits (552), Expect = 6e-61
 Identities = 135/405 (33%), Positives = 219/405 (54%), Gaps = 14/405 (3%)

Query: 12  RYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQLTVY-T 70
           R+ R RK     S I++ +  GI LGVA LIV  S MNG E +LK RIL  VP   +   
Sbjct: 13  RFSRGRKRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELKNRILAVVPHGEIEPV 72

Query: 71  KAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLSAVAQ 130
           K P  DW+   +++  +PG+    P ++   ++++ A +RAV V GV P+   +LSA+ +
Sbjct: 73  KQPFKDWSSILQRVEKVPGILAAAPYINFTGLMENGAQLRAVGVKGVDPQQENQLSALPK 132

Query: 131 HTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRKFLVS 190
           +    A++   SG+ QVILG  +A  L V  G  V ++  +      L   P + +  V+
Sbjct: 133 YVQGDAWANFKSGEQQVILGKGVADALGVKQGSYVTVMIPNSDPQMKLLQ-PKRIRLHVT 191

Query: 191 AVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQILTAQG 250
            + ++  Q+D  +A V   DA++ +    D +  + + +ND F A  L +D  ++  +  
Sbjct: 192 GILQLSGQLDHSLAMVPLADAQQYLDM-GDSVTGIAIKVNDVFAANKLVRDAGEVTNSY- 249

Query: 251 IEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTDVAVLK 310
                  W  TYG+++  ++M + +M L + L++ VA FNIVS LVM V DK+ D+AVL+
Sbjct: 250 --VYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLR 307

Query: 311 TQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNL----NGLMATLGISILGAG-- 364
           T G +   +  IF+  GLL  ++G   G+VVG++ +L L     GL   +G S L     
Sbjct: 308 TLGAKDGFIRAIFIWYGLLAGLVGSLSGVVVGVIASLQLTNIIKGLEKLMGHSFLSGDIY 367

Query: 365 --QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATAL 407
               LP +L    + +++V  LV++L+A+ YPA RA+R+ PA  L
Sbjct: 368 FIDFLPSELHWLDVVIVLVTALVLSLLASWYPARRASRIDPARVL 412