Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 399 a.a., Lipoprotein releasing system transmembrane protein LolC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  278 bits (711), Expect = 2e-79
 Identities = 167/404 (41%), Positives = 238/404 (58%), Gaps = 11/404 (2%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           L++G RY R R A+ F  F++  +  GI LGV AL+ V SVMNG E +L+  ILG +PQ 
Sbjct: 7   LFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA 66

Query: 67  TVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLS 126
            +  +    +     EK   L GV  + P  +   ++QSA ++    + G+ P   + L+
Sbjct: 67  ILSAEHGSLNPNQMPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126

Query: 127 AVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRK 186
               +      SEL  G+Y VILG +LA QL V+ GD +RL+      ++P+G +PSQR 
Sbjct: 127 PYLVNVKQ---SELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPSQRL 183

Query: 187 FLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQIL 246
           F V   F   S+VD     V+ QDA RLMR P+  I   RL+L++P     L+   QQ L
Sbjct: 184 FTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS---QQTL 240

Query: 247 TAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTDV 306
             QG +    DWR+  G LF AV+MEKNMM L+LSLIVAVAAFNI+++L +MV++K  +V
Sbjct: 241 P-QGTK--WQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297

Query: 307 AVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGISILGAGQM 366
           A+L+TQGL    +M +F+VQG    ++G  LG  +G L+   LN LM  +G  + GA   
Sbjct: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDGAA-- 355

Query: 367 LPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
           LPV +   Q+ +I +  + + L++TLYP+ RAA  QPA ALRYE
Sbjct: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399