Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Kangiella aquimarina DSM 16071

 Score =  266 bits (680), Expect = 8e-76
 Identities = 151/419 (36%), Positives = 243/419 (57%), Gaps = 14/419 (3%)

Query: 1   MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
           M L F L+VG RY RA++ N F SFI+L ++ GI LGV  LI V SVMNG E +L+ RIL
Sbjct: 1   MRLPFSLFVGLRYTRAKRRNHFISFISLISMIGIALGVMVLITVMSVMNGFERELRDRIL 60

Query: 61  GAVPQLTVY-TKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
           G  P + V     PL DW    + +   P V GV+P + T+ M +     R   V G+ P
Sbjct: 61  GMAPHVLVQGLGGPLEDWQSLEKTVKQHPEVVGVSPYIQTETMFRFQGRERFGMVQGILP 120

Query: 120 ELAEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179
           E   ++S V  +   G+F ++ +G+Y ++LG+ +AR L ++ GD V LL       S  G
Sbjct: 121 EKIGEVSIVKDNMSMGSFDDIKAGEYNIVLGASVARGLGINLGDKVSLLILSETRISLAG 180

Query: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALA 239
                ++F V+ +FE  S+ D  +A++H  DA +L+RQ  + +  L+L  N+        
Sbjct: 181 VSMRTKRFTVTGIFETRSEADKSLAFIHMDDAAQLLRQ--EGVTALQLKTNNVMNVYDTN 238

Query: 240 KDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMV 299
             V ++L  Q      +DW   +  LF+A+ MEK +M ++L+ I+AVAAFNIV++LVM+V
Sbjct: 239 YQVSELLEHQYF---VTDWTRQHETLFNAIDMEKKIMFILLTFIIAVAAFNIVTSLVMLV 295

Query: 300 VDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMA----T 355
            +K  D+A+L+T G    +++ IF+  G++N ++G   G+++G+L+ LNL  +++    T
Sbjct: 296 TEKQADIAILRTLGASPGSILRIFMTSGIINGLIGTLAGVILGVLLALNLPDIVSWVETT 355

Query: 356 LGISILGAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            G+S+          LP +L +  +  I +    ++++ATLYP+ +A++ QPA ALRYE
Sbjct: 356 FGVSVFPQDVYFVNFLPTELIVDDVVKIGLSAFAISVLATLYPSWKASKTQPAEALRYE 414