Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., lipoprotein-releasing ABC transporter permease subunit LolC from Dickeya dianthicola ME23

 Score =  291 bits (746), Expect = 2e-83
 Identities = 171/405 (42%), Positives = 245/405 (60%), Gaps = 12/405 (2%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           L++G RY R R A+ F  F++  +  GI LGV AL+ V SVMNG E +L+  ILG +PQ 
Sbjct: 7   LFIGLRYMRGRAADRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELENSILGLMPQA 66

Query: 67  TVYT-KAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKL 125
            + T +  L+  T+ +  L+ L G+  + P  +   ++QSA ++    + GV P+  E L
Sbjct: 67  IITTPQGSLNPQTLPSSSLSSLQGISRIAPLTTGDVVLQSARSVAVGVMLGVNPDEQEPL 126

Query: 126 SAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQR 185
           +    +T+     +L  GQYQVILG +LA QL V  GD++RL+       +P+G VPSQR
Sbjct: 127 ANYLVNTH---LQQLQPGQYQVILGEQLASQLGVKTGDSLRLMVTSASQLTPMGRVPSQR 183

Query: 186 KFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQI 245
            F V+  F   S+VD     V+ QDA RLMR P   I   RL+LN P T   L+   QQ 
Sbjct: 184 LFTVAGTFSARSEVDGYQLLVNQQDASRLMRYPLGNITGWRLWLNQPLTVDTLS---QQA 240

Query: 246 LTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305
           L          DWR+  G LF AV+MEKNMM L+LSLIVAVAAFNI+++L ++V++K  +
Sbjct: 241 LPPG---TQWKDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLLVMEKQGE 297

Query: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGISILGAGQ 365
           VA+L+TQGL    +M +F+VQG    V+G  +G ++G+++   LN LM  LG+ I G   
Sbjct: 298 VAILQTQGLTRRQIMAVFMVQGGGAGVMGALVGAILGMVLASQLNTLMPMLGLLIDGGA- 356

Query: 366 MLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            LPV++ L Q+  I +  +++ L++TLYP+ RAA   PA ALRYE
Sbjct: 357 -LPVQIQLAQVIAIALVAMLLALLSTLYPSWRAAATHPAEALRYE 400