Pairwise Alignments

Query, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  231 bits (589), Expect = 6e-65
 Identities = 134/375 (35%), Positives = 214/375 (57%), Gaps = 2/375 (0%)

Query: 172 WTLITGAYLSDVKESLYEVMVDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIEALEDIA 231
           WTL+     S++   +++ +    +I   +++      ++L   +  P+     AL  I 
Sbjct: 272 WTLVAEVPESEIYAQMHQAVWLTSLIGGAVALVSLLLVVLLARGLVRPIRRVTAALVQIG 331

Query: 232 QGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKLLMLAVEES 291
            G GDLS RL    +DE+  LA  FN F      ++G +    + L    + +   V+ +
Sbjct: 332 SGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNT 391

Query: 292 NQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGVIDNTVRDT 351
            + +      T  VATAV++M  T  ++A N   AA A+ S + +A Q++ V+  ++R  
Sbjct: 392 AERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGI 451

Query: 352 EKLVQEL-KASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARAGSHGRGF 410
           E +  ++ KA++A++Q L      +  +L VIR+I+EQTNLLALNAAIEAARAG  GRGF
Sbjct: 452 EGMSGDIGKAADAVSQ-LADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGF 510

Query: 411 AVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEAGQAM 470
           AVVADEVR LA RTQ ST+E+Q++I  ++ G GS + S    Q+ +      +Q  G ++
Sbjct: 511 AVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASL 570

Query: 471 AAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANESNSRAAQSLQ 530
           +AI + + HISDMN Q+A+ATEEQS VTEEINR +  IS+L   +    +      Q+L+
Sbjct: 571 SAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAEVQGCREECQALR 630

Query: 531 DISQDMSHTLGQFKI 545
            ++ D++  +G F++
Sbjct: 631 GLADDLARQMGGFRL 645