Pairwise Alignments

Query, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 544 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  240 bits (612), Expect = 1e-67
 Identities = 128/330 (38%), Positives = 206/330 (62%)

Query: 216 ITSPLNDAIEALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQ 275
           +T PL++ +  +E IA G+GDL  RL    +DE+  L+HAFN F  K+  ++  +  +  
Sbjct: 215 VTRPLHNLLHRIEQIADGDGDLRVRLDVLSRDELGKLSHAFNRFLDKLQPLIREVGRVTG 274

Query: 276 SLDNDAKLLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKS 335
            + + A+ L      +++     H     V+TA  +M +  HE+A N Q AADAA + + 
Sbjct: 275 EVADSAQTLAGMAAANDRLISSEHAAVDQVSTAATEMSAAVHEVARNAQNAADAARTAEV 334

Query: 336 QAQQSKGVIDNTVRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALN 395
           Q+++   V+  T+    +L  E++++    Q L Q +  IG++L VI+ IAEQTNLLALN
Sbjct: 335 QSREGAEVVGATIHAIRQLAHEVESASETIQTLEQETANIGAVLAVIKGIAEQTNLLALN 394

Query: 396 AAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQ 455
           AAIEAARAG  GRGFAVVADEVRALA RTQDST +IQ++I  +Q+GV + +++      Q
Sbjct: 395 AAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQQMIERLQSGVQNAVKAMHSGSAQ 454

Query: 456 SEELQAKAQEAGQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVS 515
           + +   +A     A++A  + +A I+DM  Q+A+A +EQS VTEEI RNI +I +L+  +
Sbjct: 455 ARDSVERAAGVDGALSATGDSVARINDMAAQIANACDEQSSVTEEIARNISDIRDLSNEA 514

Query: 516 VKANESNSRAAQSLQDISQDMSHTLGQFKI 545
            + +E +++A+  L ++S  ++  +G+F++
Sbjct: 515 AQTSEQSTQASARLSELSHGLAQLVGRFRV 544