Pairwise Alignments

Query, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  307 bits (786), Expect = 3e-87
 Identities = 196/580 (33%), Positives = 314/580 (54%), Gaps = 20/580 (3%)

Query: 182  ERSRSLEFQRLAVKIFDRLPLALVITNASHSVLYANDAFKLMVCLQPDDILAFNPEQF-F 240
            ++ R+ +  R+A  +F+    A++IT+ +  ++ AN+AF  +      ++L   P     
Sbjct: 707  QQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTV 766

Query: 241  SPSEPHEIASLFNHLSEGKMWQGELVGLRNNGETFYLDLTVTVFRESHSADLGFAWLFSD 300
               +   +  +   L +   W+GE+   R +G+ +   + +T   +       +   F+D
Sbjct: 767  DEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTD 826

Query: 301  VSERKKAAQLIKYQANNDSLTGLANRNALF--RQIQELINADSLTPGFSFMLMDLDNFKQ 358
            +SERK + Q I   A  D+LT L NR  LF  R    L  A+        M +DLD FK 
Sbjct: 827  ISERKASEQRIHRLAYYDALTHLPNRT-LFQDRLYNALQQAERQKAWVVLMFLDLDRFKP 885

Query: 359  VNDTYGHDKGDVLLVQMVEQVKICLDPQAVFARLGGDEFAILLPGVVTQRELS-----QL 413
            +ND+ GH  GD +L  M  ++  C+D     AR+GGDEF +LL    T RE++      +
Sbjct: 886  INDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPT-REMALNRAIHV 944

Query: 414  ADKINKQVYRRYELSHDKGVYSSVSIGIARFPEDALDLEQLLNCADQAMYISKANGRNRY 473
            A+ I   + R + L + +  + + SIGIA  P+D  +L QL+  AD AMY +K  G+N +
Sbjct: 945  AENILGSLVRPFVLEN-REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNF 1003

Query: 474  HFFTEQMQQNAERIANLHTLLKQALEQNAFELYFQPIVDATTGLIVRAEVLLRWQHEGQ- 532
             F+  +M  +A     L + L+ A+EQN F LY+QP        +  AE LLRW+H  + 
Sbjct: 1004 QFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRG 1063

Query: 533  FISPDEFIPIAENSGLIVSIGRCV-RQAVMQTIVEMQALGWPMSLAINVSTFEFWSHELQ 591
             + P +FIP+ E  GL+V +G  V R+A  Q     +A      +++N+S  +F   +L 
Sbjct: 1064 LVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLG 1123

Query: 592  DEFCDSFTDIIEGLGVEDFPYELITLEITESLLMKKHAHLIQVLNELRARGIKISLDDFG 651
                +    I+E  G+   P   + LE+TES+LM++    +Q+L  L+  G+ I++DDFG
Sbjct: 1124 TRIAN----ILEESGL---PPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFG 1176

Query: 652  TGYSSLSYLANFPIDQIKIDKSFIDRLAEGERHLALIEAIVRLSHALNLRVTAEGVETQE 711
            TGYSSL+YL  FPID +KID++F+D L EGE+   +  AI+ ++H+LNL V AEGVET E
Sbjct: 1177 TGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHE 1236

Query: 712  QLQVMMDNHIQEIQGYLFYKPIPKAVFFELLAKQAVISPH 751
            QL+ + ++   E+QGYLF +P+P   F    + + +   H
Sbjct: 1237 QLEFLREHGCDEVQGYLFGRPMPAHQFEAQFSNETLFMFH 1276