Pairwise Alignments

Query, 404 a.a., sun protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 423 a.a., tRNA/rRNA cytosine-C5-methylase from Variovorax sp. SCN45

 Score =  194 bits (493), Expect = 4e-54
 Identities = 135/375 (36%), Positives = 186/375 (49%), Gaps = 20/375 (5%)

Query: 12  ELVINILAMVLSEGKPLDRAYSQHFSGLK-LVPAEQARITTVTGDILRRLNLYCFLADIK 70
           E   +++ +VL    P D+  S+ F   +   P E+A +      +LR+  L+  L+   
Sbjct: 8   EATADLVGLVLKFDHPADQVVSRFFRDHREFGPRERAALAETVYTVLRKKLLFDHLSPSG 67

Query: 71  PEEMERLGSKLLNVW-------HLFHELELPKMQYSLPVDPDDLVARIEQAKTNPVLWDG 123
               ER  + +L  +          ++ E   +     V PDDL+ R             
Sbjct: 68  TGSKERRMA-ILGFYGPRDFLKSALNDTEKRWLDNCDAVKPDDLLERHRH---------N 117

Query: 124 CPEWLDTMGREQLGASWEKERAALNRPPKRFLRVNGLKVSRDELVQKLATEFVSTQVVDS 183
            PEWL    + QLG  +     +L +P    LRVN L   R ++  +LA   + ++V   
Sbjct: 118 LPEWLVAPLKAQLGDGFWPLVESLQQPAPLDLRVNALTDKRADVKVELAKAAIKSEVTPF 177

Query: 184 VDSALEVTSDSALFRTNSFKEGLFEQQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHI 243
               L +    AL + ++F  G  E QD GSQ +A  LDAK G  V+D CAGAGGKTL I
Sbjct: 178 SPWGLRIEGKPALTKLDAFARGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAI 237

Query: 244 AAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSK--TIKRLKLTADRVLL 301
            A M+  GRL A D    +LD LK R  R+   N+    I   +   IKRL    DRVL+
Sbjct: 238 GATMRNTGRLYAFDTSAHRLDALKPRLARSKLSNVHPAAIAHERDDRIKRLAGKIDRVLV 297

Query: 302 DVPCSGLGVLKRNPDAKWRDTADRLPVLMELQKHILSSYSRMVKVGGIVVYATCSIFPCE 361
           D PCSGLG L+RNPD KWR +A  +  L   Q  IL S +R+VK GG +VYATCS+ P E
Sbjct: 298 DAPCSGLGTLRRNPDLKWRQSAKAVEELTVKQTAILQSAARLVKSGGRLVYATCSVLPEE 357

Query: 362 NRGQVDAFLAENPNF 376
           N    +AF A NP+F
Sbjct: 358 NEAIAEAFGAANPDF 372