Pairwise Alignments

Query, 269 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 257 a.a., cell envelope biogenesis protein OmpA from Pseudomonas simiae WCS417

 Score = 62.4 bits (150), Expect = 9e-15
 Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 24/205 (11%)

Query: 57  GGGALLGALVGGPVGAVVGGITGTLIGQSVADTELVSVTLKNPQQHIAVQRQQVTSLTVK 116
           G GAL GAL G  +     G  G LIG  VA            QQ   ++          
Sbjct: 49  GLGALAGALAGAAIDHNNRG-KGALIGAVVAGAGAAGYGYYADQQEKKLR---------- 97

Query: 117 QLASEQRAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLPQLDNVAT 176
               E  A      Q+  D +         +L +  N+ F T S  + + F   L+N+A 
Sbjct: 98  ----ESMANTGVEVQRQGDQI---------KLIMPGNITFATNSDAISSSFYLPLNNLAN 144

Query: 177 VMKRSSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQALGAAMS 236
            +K+ +++ +++ GY +  G  + N  LS+ R   V +YL  QGV  A ++ +  G    
Sbjct: 145 SLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVNGANLSARGAGPDNP 204

Query: 237 LNEQLDSESDVSDRRVTLTIPPTQG 261
           +    D      +RRV + + P  G
Sbjct: 205 IASNADVNGRAQNRRVEVNLGPIPG 229