Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 240 a.a., phosphate regulon transcriptional regulatory protein PhoB from Magnetospirillum magneticum AMB-1

 Score =  121 bits (303), Expect = 1e-32
 Identities = 84/230 (36%), Positives = 119/230 (51%), Gaps = 12/230 (5%)

Query: 4   IAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDGGF 63
           + +VEDEAA+    +  L++ GY V   AD   A+     R PDL ++D  L +    G 
Sbjct: 14  VLVVEDEAALATMLRYNLEKEGYRVAEAADGEEALTVLAERKPDLVLLDWMLPSL--SGI 71

Query: 64  MLCQSLRAMSNT--LPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRR 121
            +C+ +R    T  LPII LTAR  + D + GL  GADDYL+K  S P L AR+ AL RR
Sbjct: 72  EICRQIRRKPATRELPIIMLTARGEEGDKIRGLNTGADDYLTKPFSLPELMARVRALLRR 131

Query: 122 SELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHE 181
               A    Q+  +  G +++D    +V     AI L  TEF ++    +HPG V SR E
Sbjct: 132 ----AQPVSQKGQISWGDVSMDLASHRVVRAGKAIHLGPTEFRLLQFFLQHPGTVFSREE 187

Query: 182 LMQEA---KIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDS 228
           L+       I+V+  T+  H++R+RK  +    E D I TV   GY  D+
Sbjct: 188 LLDAVWGPDIYVEPRTVDVHIRRLRKA-LNCDTEADIIRTVRAAGYALDN 236