Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 231 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  158 bits (400), Expect = 7e-44
 Identities = 92/227 (40%), Positives = 132/227 (58%), Gaps = 7/227 (3%)

Query: 4   IAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDGGF 63
           IA+V+D+  I  +    L+  G+ V+TY D   A+    ++  DLA++DI +      G 
Sbjct: 5   IALVDDDRNILTSVSMALEAEGFKVRTYTDGAEALRGLTSQPADLAVLDIKMPRM--DGM 62

Query: 64  MLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRRSE 123
            L Q LR  S  +P+IFLT++D + D + GLR+GADDY+ K  S   L  R+  L RR E
Sbjct: 63  ELLQRLRKQS-AIPVIFLTSKDDEIDELLGLRMGADDYIKKPFSQKLLIERIRTLIRRLE 121

Query: 124 LAASQTPQ-ENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHEL 182
             A    Q    L RG L +D  R    W    ++LTVTEF ++ +LA  PGHV++R +L
Sbjct: 122 ANAEGAEQGGETLVRGLLVLDPGRHICTWKGKPVDLTVTEFLLLKSLAMRPGHVKNRDQL 181

Query: 183 MQEA---KIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRW 226
           +  A    I+VDD TI SH+KR+RKKF     +F  I+T+YG+GYR+
Sbjct: 182 IDAAYGESIYVDDRTIDSHIKRLRKKFREVDDDFAQIETLYGVGYRY 228