Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., two-component system response regulator BaeR from Serratia liquefaciens MT49

 Score =  122 bits (305), Expect = 8e-33
 Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 11/229 (4%)

Query: 3   RIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDGG 62
           +I IVEDE  + +   D LQ  GY+ +   +    + A +   P L ++D+ L      G
Sbjct: 9   QIMIVEDEPKLGQLLVDYLQAAGYATRWLTNGSEVVPAVHEHSPALILLDLMLPGS--DG 66

Query: 63  FMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRRS 122
             +C+ LR  ++ +P++ +TA+  + D + GL +GADDY+ K  S   + AR+  + RR 
Sbjct: 67  LTVCRELRRFTD-IPVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRC 125

Query: 123 ELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHEL 182
                  P +N+ E   L ID  R Q  +    ++LT  EF ++  LA  PG+V SR +L
Sbjct: 126 -----YRPLDNMQEETQLHIDEPRFQASYQGQMLDLTPAEFRLLKTLASQPGNVFSREQL 180

Query: 183 MQ---EAKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDS 228
           +    +    V D TI SH+K +R+K      E   I +VYG+GYRW+S
Sbjct: 181 LNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWES 229