Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., proteobacterial dedicated sortase system response regulator from Kangiella aquimarina DSM 16071

 Score =  257 bits (656), Expect = 2e-73
 Identities = 124/226 (54%), Positives = 165/226 (73%)

Query: 2   KRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDG 61
           KRIA+VEDE  +++NY   L++ GY V  Y  +  A  AF+TRLPDL ++DIGLG+E + 
Sbjct: 3   KRIALVEDEPILQQNYSMALKKAGYEVMVYGTKKEATTAFSTRLPDLVLLDIGLGDEPEA 62

Query: 62  GFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRR 121
           GF +C++LR  S+ LPIIFLTA DSDFD + GLRLGADDYL+K++S PHL AR++ALFRR
Sbjct: 63  GFEVCRNLRQQSSQLPIIFLTALDSDFDIISGLRLGADDYLTKDISMPHLLARISALFRR 122

Query: 122 SELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHE 181
            +   +     ++   G L ID  R+ + W    ++LTV+EFW+V+ALA+ PGHV++R +
Sbjct: 123 LDTINTPGAGNSVQTVGDLEIDNERLGLSWKGQPVDLTVSEFWIVNALAQKPGHVKNRDQ 182

Query: 182 LMQEAKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWD 227
           LMQ  K  VDDSTITSH+KRIR+KF     EFD I+TVYGMGYRW+
Sbjct: 183 LMQAVKAVVDDSTITSHIKRIRQKFQRIDKEFDAIETVYGMGYRWN 228