Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., response regulator transcription factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  160 bits (404), Expect = 3e-44
 Identities = 92/234 (39%), Positives = 137/234 (58%), Gaps = 11/234 (4%)

Query: 1   MKRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEID 60
           M  I +V+D+  I  +    L+ HG+ +  Y D  S + A  +  PDLAI+D+ +     
Sbjct: 1   MANITLVDDDENIVASVSLALESHGHKITAYHDGASGLAALESSPPDLAILDVKMPRM-- 58

Query: 61  GGFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFR 120
            G  + + LR  S  +P+I LT++D + D + G  LGADDY+ K  S   L  R+ AL R
Sbjct: 59  DGMEVLRRLRQTSQ-IPVIMLTSKDEEIDEILGFNLGADDYIHKPFSQRLLIERVKALLR 117

Query: 121 RS-----ELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGH 175
           R+     E  ++       ++RG L++D  R +  W+   ++LTVTEF ++ ALA+ PG 
Sbjct: 118 RTGADGGEPESAAEVSGRAIKRGKLSMDPARHESTWDGKPVKLTVTEFLLLQALAQRPGF 177

Query: 176 VRSRHELMQEA---KIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRW 226
           V+SR  LM  A   +++VDD TI SHVKR+RKKF A   EFD I+T+YG+GYR+
Sbjct: 178 VKSRDNLMDAAYDDQVYVDDRTIDSHVKRMRKKFRAVDNEFDAIETLYGVGYRY 231