Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., Uncharacterized chaperone protein YegD from Variovorax sp. SCN45

 Score =  160 bits (404), Expect = 1e-43
 Identities = 140/479 (29%), Positives = 206/479 (43%), Gaps = 82/479 (17%)

Query: 3   VGFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYRALPAELKADY 62
           +G D+G++N AV         LLP+   +  LP+ ++                       
Sbjct: 12  IGIDFGTSNSAVACRVDGAARLLPIEGAATTLPTAIF----------------------- 48

Query: 63  AKKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLR 122
                               ++E      G  A+A YL    EG  +RS KS LG+  L 
Sbjct: 49  -------------------FNSEDRTTHFGRDAIAQYLS-GTEGRLMRSLKSLLGSA-LM 87

Query: 123 PEQVAL------FEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIG 176
            E+ A+      FEDI+   ++ + VRA   L Q              VIGRPV+F    
Sbjct: 88  QEKTAIYDGLVSFEDIIARFLRELAVRAGRELGQLP---------ERVVIGRPVHFVDDD 138

Query: 177 GEESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCS 236
            +   R AE  L +AA+ AGF ++AF  EP+AA  DYE  +  +  VL+VD+GGGT+D +
Sbjct: 139 PKRDER-AEESLRVAARAAGFREIAFQLEPIAAAFDYEQRIAKESIVLIVDIGGGTSDFT 197

Query: 237 VVKMGPSHKASFDRSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNP 296
           VV++GP   A  DRS D L  SG  IGG D D  L +   MPHFG       G+ +PS  
Sbjct: 198 VVRVGPDRAAREDRSDDVLATSGVHIGGTDFDQRLNLERVMPHFGFRHHGPQGREVPSKV 257

Query: 297 FWNAVAVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAERA 356
           F+   + + I+    +A  + R+   EL        L  RL+ V +++  ++I    E A
Sbjct: 258 FFELSSWHLINWL--YAAKAVRQ-AKELRTSYSDTRLHDRLMNVLEERHGHRIASAVEAA 314

Query: 357 KIALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGNG 416
           KI   DA  T++            ++ DC E  +  SL   +      + Q       N 
Sbjct: 315 KI---DASVTDA---------ETAIDLDCAERGLVASLSPAD------MAQQLAGPLENV 356

Query: 417 LAPEELSVE-AGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGL 474
           +A     V+ AG      D IY+TGG++        +   +    +V GD FG V  GL
Sbjct: 357 IACAHACVKRAGLRSGDLDAIYLTGGSSALRPFQHALRKSFAGVNLVEGDLFGGVATGL 415