Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., molecular chaperone DnaK from Mucilaginibacter yixingensis YX-36 DSM 26809

 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 105/469 (22%), Positives = 177/469 (37%), Gaps = 129/469 (27%)

Query: 3   VGFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMD---RELIAEAVYRALPAELK 59
           +G D G+ N  V +M+G+E  ++  S      PS +  +D   R++   A  +++    K
Sbjct: 5   IGIDLGTTNSCVAVMEGNEPVVIANSEGKRTTPSVVAFVDNGERKVGDPAKRQSITNPTK 64

Query: 60  ADYAKKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYV-----RSPKS 114
             Y+ KR                       F+G Q      E     + V      +P+ 
Sbjct: 65  TIYSIKR-----------------------FIGNQFSEVTREAERVPYKVVKGDNNTPRV 101

Query: 115 FLGATGLRPEQVALFEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQG 174
            +G     P++++       +++Q +K  AE  L Q+         +T AVI  P  F  
Sbjct: 102 EIGDRKYTPQEIS------AMILQKMKKTAEDFLGQE---------VTEAVITVPAYFND 146

Query: 175 IGGEESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAG-LKADQTVLVVDVGGGTT 233
               ++ ++A  I  L  KR        + EP AA + Y       D  ++V D GGGT 
Sbjct: 147 -AQRQATKEAGEIAGLNVKR-------IINEPTAAALAYGLDKAHKDMKIVVFDCGGGTH 198

Query: 234 DCSVVKMGPSHKASFD-RSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPM 292
           D SV+++G      F+ +S D   H    +GG+D D  +                     
Sbjct: 199 DVSVLELG---DGVFEVKSTDGDTH----LGGDDFDQVII-------------------- 231

Query: 293 PSNPFWNAVAVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRL 352
                W                     L DE  K  E  +L K  + +Q      ++   
Sbjct: 232 ----DW---------------------LADE-FKSEEGLDLRKDPMALQ------RLKEA 259

Query: 353 AERAKIALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSL 412
           AE+AKI LS    +E +L +I A+           + +   L  +++L      Q A SL
Sbjct: 260 AEKAKIELSSTTQSEINLPYITAV-----------DGMPKHL--VKSLTRAKFEQLADSL 306

Query: 413 TGNGLAPEELSVE-AGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTP 460
               + P + +++ AG +  + D I + GG+ R PAI   +   +   P
Sbjct: 307 IKRTIEPCQKALKNAGFSTSEIDEIILVGGSTRIPAIQEAVQKFFGKAP 355