Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., Putative heat shock protein YegD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  391 bits (1004), Expect = e-113
 Identities = 216/484 (44%), Positives = 307/484 (63%), Gaps = 37/484 (7%)

Query: 1   MFVGFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYRA--LPAEL 58
           +F+GFDYG+ANC+V IM+     LL +  +SA LPS L A  RE ++E +YR   +PA  
Sbjct: 1   VFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREAVSEWLYRHHDVPAT- 59

Query: 59  KADYAKKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGA 118
                ++  A L RA     E D++  + +V  G  ++A Y++ P+E ++V+SPKSFLGA
Sbjct: 60  ----DEETQALLRRAIRYNREEDIEVGAQSVQFGLASLAHYIDDPQEVWFVKSPKSFLGA 115

Query: 119 TGLRPEQVALFEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGE 178
           +GL+P+QVALFED+V  MM HI+  A + L +          IT AVIGRP+NFQG+GG+
Sbjct: 116 SGLKPQQVALFEDLVCAMMVHIRHTAHSQLPEA---------ITQAVIGRPINFQGLGGD 166

Query: 179 ESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSVV 238
           ++NRQA+ IL  AAKRAGF +V F +EP+AAG+DYEA L+ ++ VLVVD+GGGTTDCS++
Sbjct: 167 DANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTDCSML 226

Query: 239 KMGPSHKASFDRSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFW 298
            MGP  +   DR    LGHSG R+GGNDLDIALA    MP  G+G     G  +P  P+W
Sbjct: 227 LMGPQWRQRADRENSLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALPVLPWW 286

Query: 299 NAVAVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAERAKI 358
           NAVA+ND+ AQ +F + +  +L+++L++ A + + +  LLKV +Q+LSY++VR AE +KI
Sbjct: 287 NAVAINDVPAQSDFYSSANGRLLNDLVRNAREADKVALLLKVWRQRLSYRLVRCAEESKI 346

Query: 359 ALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGNGLA 418
           ALS      + L FI   L+  +++   E A++  L +I                     
Sbjct: 347 ALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLTRI--------------------- 385

Query: 419 PEELSVEAGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWA 478
            E++ +   +A+ +PDVIY+TGG+ARSP I   ++   P  PV  GD FGSVTAGL RWA
Sbjct: 386 LEQVQLALDSAQEKPDVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWA 445

Query: 479 QKHF 482
           +  F
Sbjct: 446 EVVF 449