Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 434 a.a., molecular chaperone from Escherichia coli ECRC98

 Score =  380 bits (976), Expect = e-110
 Identities = 210/466 (45%), Positives = 291/466 (62%), Gaps = 33/466 (7%)

Query: 17  MQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYRALPAELKADYAKKRAAQLSRARMV 76
           M+  +  LL +  DS  LPS L A  RE ++E +YR        D  +   A L RA   
Sbjct: 1   MRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQ---ALLRRAIRY 57

Query: 77  RHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRPEQVALFEDIVTLM 136
             E D+D  + +V  G  ++A Y++ PEE ++V+SPKSFLGA+GL+P+QVALFED+V  M
Sbjct: 58  NREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAM 117

Query: 137 MQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGEESNRQAEAILTLAAKRAG 196
           M HI+ +A+A L +          IT AVIGRP+NFQG+GG+E+N QA+ IL  AAKRAG
Sbjct: 118 MLHIRQQAQAQLPEA---------ITQAVIGRPINFQGLGGDEANAQAQGILERAAKRAG 168

Query: 197 FVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSVVKMGPSHKASFDRSRDCLG 256
           F DV F +EP+AAG+DYEA L+ ++ VLVVD+GGGTTDCS++ MGP  ++  DR    LG
Sbjct: 169 FRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLG 228

Query: 257 HSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNAVAVNDISAQREFATLS 316
           HSG RIGGNDLDIALA    MP  G+G     G  +P  P+WNAVA+ND+ AQ +F + +
Sbjct: 229 HSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSA 288

Query: 317 TRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAERAKIALSDAHTTESSLEFIEAM 376
             +L+++L+++A +P  +  L KV +Q+LSY++VR AE  KIALS    T +SL FI   
Sbjct: 289 NGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISDE 348

Query: 377 LSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGNGLAPEELSVEAGTAECQPDVI 436
           L+  +++   E+A+   L +I+                     E++ +    A+ +PDVI
Sbjct: 349 LATLISQQGLESALSQPLARIQ---------------------EQVQLALDNAQEKPDVI 387

Query: 437 YVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQKHF 482
           Y+TGG+ARSP I   +    P  P+  GD FGSVTAGL RWA+  F
Sbjct: 388 YLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVF 433