Pairwise Alignments

Query, 596 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 593 a.a., DUF3413 domain-containing protein from Serratia liquefaciens MT49

 Score =  304 bits (778), Expect = 8e-87
 Identities = 192/607 (31%), Positives = 299/607 (49%), Gaps = 42/607 (6%)

Query: 6   KQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFL 65
           +Q  R++VS++I+WGHWFA FN LLA+ +G+RYL    +P +  G  Y  VS +G FSF+
Sbjct: 5   RQRYREKVSQMISWGHWFALFNILLALGLGSRYLFVTDWPSSLLGRVYALVSLLGHFSFI 64

Query: 66  AFIAYLICLFPLTLILPYSKILRGLAAVIATLSLCLLLYDTIVYADYGMHLSPFAFD-IA 124
            F  YL+ +FPLT ++   ++LR ++A +AT  L LLL D+ V+  + +HL+P  ++ + 
Sbjct: 65  VFAGYLLVIFPLTFVVMSQRLLRFISAALATTGLTLLLVDSEVFTHFHLHLNPVVWELVV 124

Query: 125 WADLSALLHG--TSYIVTPIAILAIELTAANFLWKRIEKIQKLNLGNKVIAFVGVCFVSS 182
             D S L       +I  P+ I  +E+    + W+++  + +   G  +       F +S
Sbjct: 125 NPDQSELARDWQLMFICVPV-IFLVEMLFGTWSWQKLRSLNRQRFGKPLAVLFISAFFAS 183

Query: 183 HLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQINDEATQASN----TL 238
           HLI+IWADA     IT      PLSYP TAR F+E HG+  S +      Q  N     +
Sbjct: 184 HLIYIWADANFYRPITMQRANLPLSYPMTARKFLEKHGLLDSQEYERRLVQQGNPEAVAV 243

Query: 239 SYPIQPLQC-QADSKSNVLMLTIDSLR-ADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQF 296
            YP+  L      S  N+LM+ +D +R  DM   + MP L ++ ++N  F+ HYS GN  
Sbjct: 244 EYPLNDLSYDDKGSGYNLLMIVVDGVRQQDM--KQDMPALSRFAQENIRFSDHYSSGNHA 301

Query: 297 KTGMFSLLYGLQGSYGDARIFNNTSPLMIRSFKQAGYELGLFIPETNLNLRSAQAMFNDF 356
            TG+F L YG+  +Y D+ +       +I +    GY+ GLF  +        QA+  DF
Sbjct: 302 DTGLFGLFYGISPTYLDSILAARKPSALISALSAQGYQFGLFSSDGFNASLYRQALLTDF 361

Query: 357 TPVIAEETNGSAEADILSVGHFKQWQSAQ--QRPWFALVNLKAPENFDTPVGFLGIETVK 414
           T     + N     D ++   +++W + Q    PWF+ +N +  E               
Sbjct: 362 TLPAPVQQN-----DAVTTQQWQRWLADQNSNAPWFSYINFRGAE--------------P 402

Query: 415 ADPNLKPAQKVLFNQYRQSLNFIDKQIQAIVSELP-----SDTLVVITGVNGKIFTSNSD 469
           A     PA      +YR     +D QI  +++ L        T+VVIT  +G  F     
Sbjct: 403 AANEKTPAPADFIQRYRAGAQDVDAQIAQVLNTLKERGVLDKTVVVITAEHGVEFNDTGK 462

Query: 470 ---EALRNLSPESVRVPLVIHWPNALASKVNYRTSHYGVVPTLMTHVLGCTNNTSDYSAG 526
               A R+ S + ++VPL+IHWP   A  +N  T H  V+ TLM  +L    +  DYS G
Sbjct: 463 GYWGAGRSFSQQQLQVPLIIHWPGTPAQTINKLTGHNDVMRTLMQRLLHVKTSPKDYSQG 522

Query: 527 RSLLQPS-KETWIYIGDSRIFAIYQQSEITVIDRHGKYRIYDENFEHRLHKKMSAPELIQ 585
             L     +  W+  GD+ +  I   ++  V+D  G Y  YD+N +    +K     L+Q
Sbjct: 523 EDLFTAQRRNNWVATGDNSLLVITTPTQTLVLDSSGNYHAYDKNDKEIKDEKPQLALLLQ 582

Query: 586 VLREGRR 592
           VL + +R
Sbjct: 583 VLTDVKR 589