Pairwise Alignments

Query, 596 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 586 a.a., LPS biosynthesis-modulating metalloenzyme YejM from Escherichia coli ECRC98

 Score =  300 bits (769), Expect = 8e-86
 Identities = 193/604 (31%), Positives = 314/604 (51%), Gaps = 43/604 (7%)

Query: 6   KQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFL 65
           +Q  R++VS++++WGHWFA FN LL++++G+RYL    +P T  G  Y  VS IG FSFL
Sbjct: 5   RQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFL 64

Query: 66  AFIAYLICLFPLTLILPYSKILRGLAAVIATLSLCLLLYDTIVYADYGMHLSPFAFDIAW 125
            F  YL+ LFPLT I+   +++R L+ ++AT  + LLL D+ V+  + +HL+P  + +  
Sbjct: 65  VFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVI 124

Query: 126 -ADLSALLHG--TSYIVTPIAILAIELTAANFLWKRIEKI-QKLNLGNKVIAFVGVCFVS 181
             D + +       +I  P+ IL +EL  A + W+++  + ++      + AF+ + F++
Sbjct: 125 NPDENEMARDWQLMFISVPV-ILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIAFIA 183

Query: 182 SHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQINDEATQASN----T 237
           SH+++IWADA     IT      PLSYP TAR F+E HG+  + +      +  N    +
Sbjct: 184 SHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPDAVS 243

Query: 238 LSYPIQPLQCQ-ADSKSNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQF 296
           + YP+  L+ +   +  NVL++T+D L     + K MP L  + EQN SFT+H S GN  
Sbjct: 244 VQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE-KQMPALAGFAEQNISFTRHMSSGNTT 302

Query: 297 KTGMFSLLYGLQGSYGDARIFNNTSPLMIRSFKQAGYELGLFIPETNLNLRSAQAMFNDF 356
             G+F L YG+  SY D  +   T   +I +  Q GY+LGLF  +   +    QA+ +DF
Sbjct: 303 DNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDF 362

Query: 357 T--PVIAEETNGSAEADILSVGHFKQWQSAQQRPWFALVNLKAPENFDTPVGFLGIETVK 414
           +   V  +    +A   I  +G + Q    +   WF+ V+     N D            
Sbjct: 363 SMPSVRTQSDEQTATQWINWLGRYAQ----EDNRWFSWVSFNG-TNID------------ 405

Query: 415 ADPNLKPAQKVLFNQYRQSLNFIDKQIQAIVSELP-----SDTLVVITGVNGKIFTSNSD 469
            D N    Q+    +Y ++   +D QI  +++ L       +T+V+IT   G+    + +
Sbjct: 406 -DSN----QQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITA--GRGIPLSEE 458

Query: 470 EALRNLSPESVRVPLVIHWPNALASKVNYRTSHYGVVPTLMTHVLGCTNNTSDYSAGRSL 529
           E   + S   ++VPLVIHWP   A ++N  T H  ++ TLM  +L  +   S+YS G+ L
Sbjct: 459 EETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDL 518

Query: 530 LQPS-KETWIYIGDSRIFAIYQQSEITVIDRHGKYRIYDENFEHRLHKKMSAPELIQVLR 588
             P  +  W+   D+   AI    +  V++ +GKYR Y+   E    +K     L+QVL 
Sbjct: 519 FNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLT 578

Query: 589 EGRR 592
           + +R
Sbjct: 579 DEKR 582