Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 578 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  114 bits (284), Expect = 8e-30
 Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 20/195 (10%)

Query: 116 IEIATDITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAFFNLG---LSIAQQSGQAL 172
           I +  DIT+RK+ME  L        RLA TD LT ++NRR F  +    +  A++ G+ L
Sbjct: 397 IGVMLDITERKRMEAEL-------RRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPL 449

Query: 173 AFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHH 232
             +M DID FK +ND  GH  GD A+  +A +   I++  D+LGR+GGEEF I+L +   
Sbjct: 450 VALMLDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDL 509

Query: 233 EQACQLAESIRCRFEEQPLALNGQIIKCTASFGIASITIPVIHSEK-EAQNLLETLFNSA 291
           + A  +AE +R     Q +A     I+  A  G  + T  +  +E+ E    ++T+ + A
Sbjct: 510 DGALLVAERLR-----QAVA----AIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRA 560

Query: 292 DQAMMQAKRNGRNQV 306
           D A+  AKR+GRN+V
Sbjct: 561 DMALYSAKRSGRNKV 575