Pairwise Alignments

Query, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 9e-29
 Identities = 69/162 (42%), Positives = 95/162 (58%), Gaps = 3/162 (1%)

Query: 379 SSASR-DSLTGLLNHTQILVAARHCINLAKRANSSVCIAMLDLDHFKQVNDTYGHSGGDK 437
           S+ SR DSLTGLLNH           +  ++  S   IA++D+DHFKQ+NDT+GH  GD 
Sbjct: 181 SALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQSHATIALIDIDHFKQINDTHGHIVGDA 240

Query: 438 VLLAFAHLLQQSLRAADFMGRYGGEEFMLVIPDMPAPLVIAKVNAIRESFSNIVFVEEGA 497
           VL   +  L+++LR  D  GRYGG+EF +++P MP       +  +RE+FSN     +  
Sbjct: 241 VLRQLSLELRRNLRENDLAGRYGGDEFCVILPQMPMEQAAQVMERMRETFSN-YRNPQIP 299

Query: 498 EFKVTLSGGLA-FSTECHEFQECLLLADKNLYEAKRTGRNRI 538
           E +V+LS GLA F     +    L  AD+ LY AK TGRNR+
Sbjct: 300 ELRVSLSIGLADFQPVFTDAAMWLNAADRALYAAKDTGRNRV 341