Pairwise Alignments

Query, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 352 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 9e-31
 Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 10/178 (5%)

Query: 366 QVISRAQRGHDIRSSASRDSLTGLLNH----TQILVAARHCINLAKRANSSVCIAMLDLD 421
           Q ++ A+   ++ + +  DSL+GLLNH      + +  + C    +R +    IA++D+D
Sbjct: 169 QALTLARHKRELLALSRTDSLSGLLNHGAWKDHLEIEFQRC----RRDSMGAVIALIDID 224

Query: 422 HFKQVNDTYGHSGGDKVLLAFAHLLQQSLRAADFMGRYGGEEFMLVIPDMPAPLVIAKVN 481
           HFK +NDTYGH  GD VL   + +L+Q+LRA D  GRYGG+EF +++P MP       ++
Sbjct: 225 HFKTINDTYGHVTGDIVLRQLSKVLRQNLRATDLAGRYGGDEFCVILPGMPLNRATEVMD 284

Query: 482 AIRESFSNIVFVEEGAEFKVTLSGGLAFSTECH-EFQECLLLADKNLYEAKRTGRNRI 538
           A+R+ F+ + + ++    +V+LS GLA     H +    L  AD+ LY+AK +GRNR+
Sbjct: 285 ALRDRFNALAYAQD-PTLRVSLSIGLAPYQPTHADSTSWLNDADQALYDAKSSGRNRV 341