Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 674 a.a., chemotaxis protein CheA from Dickeya dianthicola ME23

 Score =  506 bits (1303), Expect = e-147
 Identities = 302/705 (42%), Positives = 425/705 (60%), Gaps = 56/705 (7%)

Query: 3   INMAEFHQVFFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFTAL 62
           ++M+ F+Q FF+E+ E L +MEQ L+ ++  +PD E++N IFRAAHSIKGG+G FGF  L
Sbjct: 1   MDMSAFYQTFFDEADELLADMEQHLLQLDPLAPDTEQMNAIFRAAHSIKGGAGTFGFRVL 60

Query: 63  SSVTHVMENLLDKVRKGTFELSSGIIDLLLKTVDTLSHILSLYREEEPIDWQQVEFAKNQ 122
              TH++ENLLD  R+G   LS+ II+L L+T D +   L  Y+  +  + +  E+    
Sbjct: 61  QETTHILENLLDGARRGEMRLSTDIINLFLETKDIMQDQLDAYKTSQEPNAESFEY---- 116

Query: 123 LVAALNGDPFLTTSPEAIPATPTKTEITQTAVVVSDASHQDDIGF--------GFFEDDV 174
           +  AL      +   +A      K E  Q   V S A+     G         G  E D+
Sbjct: 117 ICQALRQLALESKENDAAGTASAKVEAGQP--VSSSAAPAPAGGHSGLRIALTGLKESDI 174

Query: 175 ELTLAIENQDFGFFDEAFTAKEISVEDINKTLLDSQLVTNTEPDDDLGFGFFESLTPESV 234
              L  E  + G      T KE +V+  N   L  +    +  +DD+       L P+ +
Sbjct: 175 PQLLE-ELGNLG------TVKE-TVQTSNSVELTLE---TSASEDDISAVLCFVLEPDQI 223

Query: 235 DSEINALVHIQANKAIAAIEPLSKPVNSPSVPKIPRYTGNTAESTKVAPADPVDPSPVLN 294
           +                  +  ++ V + +VP +       AE    AP  PV P     
Sbjct: 224 N-----------------FKSAAEAVPADTVPPVVAQ----AEPAPAAPVQPVAP----- 257

Query: 295 KSVASGTKSTPTAATK--KGNTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNEI 352
             VA+   + P       KG   T D ++RV   K+D L+NL GELVITQSML    + +
Sbjct: 258 --VAAAPAAKPAGGNDAAKGRQKTGDTSIRVAVEKVDQLINLVGELVITQSMLAQRSSAL 315

Query: 353 SGELGERLKTALVELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVNLVI 412
                  L  ++ +LERN R++QE+VMS+RM+P+ +VF+RF RLVRDL+ +LGK V L  
Sbjct: 316 DPVAHGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRFPRLVRDLAAKLGKEVELTQ 375

Query: 413 EGGNTEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEVRRLLGKAEIAQLSLRASQRGGNIV 472
            G +TE+DK +IE+++DPLTHLVRNSLDHGIE PE R   GK+ +  L+L A  +GGNI 
Sbjct: 376 LGSSTELDKSLIERIIDPLTHLVRNSLDHGIESPETRIESGKSAVGNLTLSAEHQGGNIC 435

Query: 473 IAVHDDGAGLHREKILQKARENNMSVTDNMPDKQIWQLIFAAGFSTAKEITDVSGRGVGM 532
           I V DDGAGL+RE+IL KA    M+V ++M D+ +  LIFA GFSTA+++TDVSGRGVGM
Sbjct: 436 IEVIDDGAGLNRERILAKALSQGMAVNESMSDEDVGMLIFAPGFSTAEKVTDVSGRGVGM 495

Query: 533 DVVRRNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSVGKQIYILPLVHIIESI 592
           DVV+RNI+ +GG ++I  V G+G T  I LPLTLAI+DGMSV V  +++ILPL  ++ES+
Sbjct: 496 DVVKRNIQEMGGHVEIHFVKGKGTTIRILLPLTLAILDGMSVKVNNEVFILPLNAVMESL 555

Query: 593 QPHTEQLKYLA-QERLIRVREEYLPLLNLHQLMEITPFAKCPEEGIVVLLESNNKRFGLC 651
           QP  E L  LA  ER+++VR EYLPL+ L+Q+ ++        +GIVV+L+S  +R+ L 
Sbjct: 556 QPQAEDLYPLAGGERVLQVRGEYLPLIELYQVFDVAGAKTDATQGIVVILQSAGRRYALL 615

Query: 652 VDALVGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVESL 696
           VD L+GQ QVV+K+LE +YR++PGVS ATI+GDGSVALI+DV +L
Sbjct: 616 VDQLIGQHQVVVKNLESNYRKVPGVSAATILGDGSVALIVDVSAL 660